RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 TMEM175Q9BSA9 504 aa17.37■□□□□ 0.37
LMNB2-203ENST00000490554 RSAD1Q9HA92 442 aa17.37■□□□□ 0.37
LMNB2-203ENST00000490554 KCNK12Q9HB15 430 aa17.37■□□□□ 0.37
LMNB2-203ENST00000490554 COL4A3BPQ9Y5P4 624 aa17.37■□□□□ 0.37
LMNB2-203ENST00000490554 DENND4AQ7Z401 1863 aa17.36■□□□□ 0.37
LMNB2-203ENST00000490554 SPDYE4A6NLX3 237 aa17.36■□□□□ 0.37
LMNB2-203ENST00000490554 ALDH2P05091 517 aa17.36■□□□□ 0.37
LMNB2-203ENST00000490554 HOXA11P31270 313 aaPredicted RBP17.36■□□□□ 0.37
LMNB2-203ENST00000490554 LETM2Q2VYF4 491 aa17.36■□□□□ 0.37
LMNB2-203ENST00000490554 UBXN11Q5T124 520 aa17.36■□□□□ 0.37
LMNB2-203ENST00000490554 CCDC105Q8IYK2 499 aa17.36■□□□□ 0.37
LMNB2-203ENST00000490554 MRPL17Q9NRX2 175 aaKnown RBP17.36■□□□□ 0.37
LMNB2-203ENST00000490554 KANSL3Q9P2N6 904 aa17.36■□□□□ 0.37
LMNB2-203ENST00000490554 FAN1Q9Y2M0 1017 aa17.36■□□□□ 0.37
LMNB2-203ENST00000490554 CNTNAP2Q9UHC6 1331 aa17.36■□□□□ 0.37
LMNB2-203ENST00000490554 EML1O00423 815 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 NRP1O14786 923 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 N4BP1O75113 896 aaKnown RBP17.35■□□□□ 0.37
LMNB2-203ENST00000490554 NPEPPSP55786 919 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 NPY5RQ15761 445 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 SRGAP1Q7Z6B7 1085 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 BLIDQ8IZY5 108 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 DAGLBQ8NCG7 672 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 CMASQ8NFW8 434 aaPredicted RBP17.35■□□□□ 0.37
LMNB2-203ENST00000490554 FAM193BQ96PV7 902 aaPredicted RBP17.35■□□□□ 0.37
LMNB2-203ENST00000490554 RTP3Q9BQQ7 232 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 MINDY3Q9H8M7 445 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 IGSF9Q9P2J2 1179 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 VPS13AQ96RL7 3174 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 SPTBN4Q9H254 2564 aa17.35■□□□□ 0.37
LMNB2-203ENST00000490554 POMCP01189 267 aa17.34■□□□□ 0.37
LMNB2-203ENST00000490554 SOD2P04179 222 aa17.34■□□□□ 0.37
LMNB2-203ENST00000490554 QARSP47897 775 aaKnown RBP17.34■□□□□ 0.37
LMNB2-203ENST00000490554 TRIM22Q8IYM9 498 aa17.34■□□□□ 0.37
LMNB2-203ENST00000490554 ADSSL1Q8N142 457 aa17.34■□□□□ 0.37
LMNB2-203ENST00000490554 SIX5Q8N196 739 aa17.34■□□□□ 0.37
LMNB2-203ENST00000490554 ZNF579Q8NAF0 562 aaKnown RBP17.34■□□□□ 0.37
LMNB2-203ENST00000490554 PRPF31Q8WWY3 499 aaKnown RBP17.34■□□□□ 0.37
LMNB2-203ENST00000490554 SLC7A3Q8WY07 619 aa17.34■□□□□ 0.37
LMNB2-203ENST00000490554 RPS6KC1Q96S38 1066 aa17.34■□□□□ 0.37
LMNB2-203ENST00000490554 DHX33Q9H6R0 707 aaKnown RBP17.34■□□□□ 0.37
LMNB2-203ENST00000490554 MAN1C1Q9NR34 630 aa17.34■□□□□ 0.37
LMNB2-203ENST00000490554 MARCH5Q9NX47 278 aa17.34■□□□□ 0.37
LMNB2-203ENST00000490554 DDX25Q9UHL0 483 aaKnown RBP17.34■□□□□ 0.37
LMNB2-203ENST00000490554 FBXL21Q9UKT6 434 aa17.34■□□□□ 0.37
LMNB2-203ENST00000490554 PPME1Q9Y570 386 aa17.34■□□□□ 0.37
LMNB2-203ENST00000490554 C2CD2LO14523 706 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 SLC37A4O43826 429 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 URODP06132 367 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 SRGAP2CP0DJJ0 459 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 NCLP19338 710 aaKnown RBP17.33■□□□□ 0.36
LMNB2-203ENST00000490554 PSMA5P28066 241 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 SSRP1Q08945 709 aaKnown RBP17.33■□□□□ 0.36
LMNB2-203ENST00000490554 PPP2R5CQ13362 524 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 NONOQ15233 471 aaKnown RBP eCLIP17.33■□□□□ 0.36
LMNB2-203ENST00000490554 ANGPT1Q15389 498 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 CYP26C1Q6V0L0 522 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 TAS1R1Q7RTX1 841 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 EXOC8Q8IYI6 725 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 COLGALT2Q8IYK4 626 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 RNF168Q8IYW5 571 aaPredicted RBP17.33■□□□□ 0.36
LMNB2-203ENST00000490554 DTWD2Q8NBA8 298 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 SMG8Q8ND04 991 aaKnown RBP17.33■□□□□ 0.36
LMNB2-203ENST00000490554 PSPC1Q8WXF1 523 aaKnown RBP17.33■□□□□ 0.36
LMNB2-203ENST00000490554 TMEM143Q96AN5 459 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 CEP170P1Q96L14 293 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 HERC2P3Q9BVR0 1158 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 RHOBTB2Q9BYZ6 727 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 WDR6Q9NNW5 1121 aaKnown RBP17.33■□□□□ 0.36
LMNB2-203ENST00000490554 WRAP73Q9P2S5 460 aaPredicted RBP17.33■□□□□ 0.36
LMNB2-203ENST00000490554 VAV3Q9UKW4 847 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 SSX2IPQ9Y2D8 614 aa17.33■□□□□ 0.36
LMNB2-203ENST00000490554 TEX28O15482 410 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 NARSO43776 548 aaKnown RBP17.32■□□□□ 0.36
LMNB2-203ENST00000490554 DKC1O60832 514 aaKnown RBP eCLIP17.32■□□□□ 0.36
LMNB2-203ENST00000490554 DEXIO95424 95 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 EFEMP2O95967 443 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 ADH1AP07327 375 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 AK2P54819 239 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 LAMTOR4Q0VGL1 99 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 INF2Q27J81 1249 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 GALNT17Q6IS24 598 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 CENPQQ7L2Z9 268 aaPredicted RBP17.32■□□□□ 0.36
LMNB2-203ENST00000490554 FAM177A1Q8N128 213 aaPredicted RBP17.32■□□□□ 0.36
LMNB2-203ENST00000490554 CNNM3Q8NE01 707 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 KCNMB3Q9NPA1 279 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 UBN1Q9NPG3 1134 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 EPS15L1Q9UBC2 864 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 WNT16Q9UBV4 365 aa17.32■□□□□ 0.36
LMNB2-203ENST00000490554 PRG3Q9Y2Y8 225 aaPredicted RBP17.32■□□□□ 0.36
LMNB2-203ENST00000490554 CCDC195A0A1B0GUA6 201 aa17.31■□□□□ 0.36
LMNB2-203ENST00000490554 INPPL1O15357 1258 aa17.31■□□□□ 0.36
LMNB2-203ENST00000490554 P4HBP07237 508 aaKnown RBP17.31■□□□□ 0.36
LMNB2-203ENST00000490554 ITGA4P13612 1032 aa17.31■□□□□ 0.36
LMNB2-203ENST00000490554 RFC5P40937 340 aa17.31■□□□□ 0.36
LMNB2-203ENST00000490554 DSC1Q08554 894 aa17.31■□□□□ 0.36
LMNB2-203ENST00000490554 TOB2Q14106 344 aaPredicted RBP17.31■□□□□ 0.36
LMNB2-203ENST00000490554 KIAA0319Q5VV43 1072 aa17.31■□□□□ 0.36
LMNB2-203ENST00000490554 KRT25Q7Z3Z0 450 aa17.31■□□□□ 0.36
LMNB2-203ENST00000490554 RSAD2Q8WXG1 361 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms