RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 VCAM1P19320 739 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 SLC16A1P53985 500 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 ADKP55263 362 aaKnown RBP5.18□□□□□ -1.58
CD46-216ENST00000490278 LRRC41Q15345 812 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 FAM180AQ6UWF9 173 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 THEMISQ8N1K5 641 aaPredicted RBP5.18□□□□□ -1.58
CD46-216ENST00000490278 PIK3C3Q8NEB9 887 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 SLC7A6OSQ96CW6 309 aaPredicted RBP5.18□□□□□ -1.58
CD46-216ENST00000490278 NUP88Q99567 741 aaPredicted RBP5.18□□□□□ -1.58
CD46-216ENST00000490278 ADI1Q9BV57 179 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 CSRNP2Q9H175 543 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 C14orf93Q9H972 538 aaKnown RBP5.18□□□□□ -1.58
CD46-216ENST00000490278 USP40Q9NVE5 1235 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 SCOCQ9UIL1 159 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 PNMA8BQ9ULN7 279 aaPredicted RBP5.18□□□□□ -1.58
CD46-216ENST00000490278 SLC4A7Q9Y6M7 1214 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 ARHGAP6O43182 974 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 TMEM127O75204 238 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 ZSCAN22P10073 491 aaPredicted RBP5.17□□□□□ -1.58
CD46-216ENST00000490278 CTSSP25774 331 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 MCAMP43121 646 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 KIF23Q02241 960 aaPredicted RBP5.17□□□□□ -1.58
CD46-216ENST00000490278 TCIRG1Q13488 830 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 NFYCQ13952 458 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 TBR1Q16650 682 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 GJC2Q5T442 439 aaPredicted RBP5.17□□□□□ -1.58
CD46-216ENST00000490278 SPOCD1Q6ZMY3 1216 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 TAS1R1Q7RTX1 841 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 PLEKHH3Q7Z736 793 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 LGI4Q8N135 537 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 MIER2Q8N344 545 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 MARCH10Q8NA82 808 aaPredicted RBP5.17□□□□□ -1.58
CD46-216ENST00000490278 SYT8Q8NBV8 401 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 GPR156Q8NFN8 814 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 SLC6A15Q9H2J7 730 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 JADE2Q9NQC1 790 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 SAP30BPQ9UHR5 308 aaKnown RBP5.17□□□□□ -1.58
CD46-216ENST00000490278 DNM3Q9UQ16 869 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 NR2E1Q9Y466 385 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 RPTORQ8N122 1335 aa5.17□□□□□ -1.58
CD46-216ENST00000490278 PRAMEF4O60810 478 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 ALDH1A2O94788 518 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 SASH1O94885 1247 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 GSPT1P15170 499 aaKnown RBP5.16□□□□□ -1.58
CD46-216ENST00000490278 KIR2DL3P43628 341 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 ADCY7P51828 1080 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 ATP2C1P98194 919 aaPredicted RBP5.16□□□□□ -1.58
CD46-216ENST00000490278 HGFACQ04756 655 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 UBE3CQ15386 1083 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 RNF151Q2KHN1 245 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 C19orf54Q5BKX5 351 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 FAM102BQ5T8I3 360 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 ABHD15Q6UXT9 468 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 SIAH1Q8IUQ4 282 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 MSL3Q8N5Y2 521 aaKnown RBP5.16□□□□□ -1.58
CD46-216ENST00000490278 OR14K1Q8NGZ2 314 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 SNX33Q8WV41 574 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 RIN2Q8WYP3 895 aaPredicted RBP5.16□□□□□ -1.58
CD46-216ENST00000490278 TSR2Q969E8 191 aaKnown RBP5.16□□□□□ -1.58
CD46-216ENST00000490278 COA7Q96BR5 231 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 DMRT3Q9NQL9 472 aa5.16□□□□□ -1.58
CD46-216ENST00000490278 RBM12Q9NTZ6 932 aaKnown RBP5.16□□□□□ -1.58
CD46-216ENST00000490278 MTSS1O43312 755 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 PHF2O75151 1096 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 TOX4O94842 621 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 JUNP05412 331 aaKnown RBP5.15□□□□□ -1.59
CD46-216ENST00000490278 U2AF1L5P0DN76 240 aaPredicted RBP5.15□□□□□ -1.59
CD46-216ENST00000490278 VSIG10L2P0DP72 767 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 BMP7P18075 431 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 AKAP5P24588 427 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 CYP2C19P33261 490 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 WASP42768 502 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 WNT3AP56704 352 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 BPIFB4P59827 614 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 PPP2CBP62714 309 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 PPP2CAP67775 309 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 U2AF1Q01081 240 aaKnown RBP eCLIP5.15□□□□□ -1.591e-20■■■■■ 29.3
CD46-216ENST00000490278 PPP3CAQ08209 521 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 NOMO1Q15155 1222 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 UAP1L1Q3KQV9 507 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 GAGE13Q4V321 117 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 RRP12Q5JTH9 1297 aaKnown RBP5.15□□□□□ -1.59
CD46-216ENST00000490278 NXNQ6DKJ4 435 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 CXorf57Q6NSI4 855 aaKnown RBP5.15□□□□□ -1.59
CD46-216ENST00000490278 ARHGEF18Q6ZSZ5 1173 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 TPH2Q8IWU9 490 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 MYO1HQ8N1T3 1032 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 ANKRD53Q8N9V6 530 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 NRG4Q8WWG1 115 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 KCNC2Q96PR1 638 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 TLR9Q9NR96 1032 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 ING3Q9NXR8 418 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 PUF60Q9UHX1 559 aaKnown RBP5.15□□□□□ -1.59
CD46-216ENST00000490278 INTUQ9ULD6 942 aa5.15□□□□□ -1.59
CD46-216ENST00000490278 NOB1Q9ULX3 412 aaKnown RBP5.15□□□□□ -1.59
CD46-216ENST00000490278 FAM171A2A8MVW0 826 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 AKR1B10O60218 316 aa5.14□□□□□ -1.59
CD46-216ENST00000490278 CNOT4O95628 575 aaKnown RBP5.14□□□□□ -1.59
CD46-216ENST00000490278 ADSLP30566 484 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms