RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 APBB1IPQ7Z5R6 666 aaPredicted RBP5.5□□□□□ -1.53
HMGN1-218ENST00000490032 LYSMD2Q8IV50 215 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 SLC41A1Q8IVJ1 513 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 ELOA2Q8IYF1 753 aaPredicted RBP5.5□□□□□ -1.53
HMGN1-218ENST00000490032 GAB3Q8WWW8 586 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 RSAD2Q8WXG1 361 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 ARL8AQ96BM9 186 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 MNTQ99583 582 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 MMRN2Q9H8L6 949 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 NCDNQ9UBB6 729 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 USP18Q9UMW8 372 aa5.5□□□□□ -1.53
HMGN1-218ENST00000490032 A0A1W2PR48 441 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 GOLGA6L6A8MZA4 724 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 MAKP20794 623 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 TGFB2P61812 414 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 PURAQ00577 322 aaKnown RBP5.49□□□□□ -1.53
HMGN1-218ENST00000490032 DPTQ07507 201 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 DHCR24Q15392 516 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 DCAF17Q5H9S7 520 aaPredicted RBP5.49□□□□□ -1.53
HMGN1-218ENST00000490032 BROXQ5VW32 411 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 RASSF3Q86WH2 238 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 LEO1Q8WVC0 666 aaPredicted RBP5.49□□□□□ -1.53
HMGN1-218ENST00000490032 ATXN2LQ8WWM7 1075 aaKnown RBP5.49□□□□□ -1.53
HMGN1-218ENST00000490032 ST8SIA2Q92186 375 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 SLC5A5Q92911 643 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 PDCD2LQ9BRP1 358 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 TRIM8Q9BZR9 551 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 SLITRK6Q9H5Y7 841 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 TRPS1Q9UHF7 1281 aa5.49□□□□□ -1.53
HMGN1-218ENST00000490032 GRXCR1A8MXD5 290 aa5.48□□□□□ -1.53
HMGN1-218ENST00000490032 HOXA3O43365 443 aaPredicted RBP5.48□□□□□ -1.53
HMGN1-218ENST00000490032 KDM1AO60341 852 aa5.48□□□□□ -1.53
HMGN1-218ENST00000490032 ADH4P08319 380 aa5.48□□□□□ -1.53
HMGN1-218ENST00000490032 MYCLP1P12525 358 aaPredicted RBP5.48□□□□□ -1.53
HMGN1-218ENST00000490032 XPAP23025 273 aaPredicted RBP5.48□□□□□ -1.53
HMGN1-218ENST00000490032 WNT3AP56704 352 aa5.48□□□□□ -1.53
HMGN1-218ENST00000490032 NRG3P56975 720 aa5.48□□□□□ -1.53
HMGN1-218ENST00000490032 DDB1Q16531 1140 aa5.48□□□□□ -1.53
HMGN1-218ENST00000490032 METTL24Q5JXM2 366 aa5.48□□□□□ -1.53
HMGN1-218ENST00000490032 LARP4BQ92615 738 aaKnown RBP5.48□□□□□ -1.53
HMGN1-218ENST00000490032 GPRC5BQ9NZH0 403 aa5.48□□□□□ -1.53
HMGN1-218ENST00000490032 PRSS50Q9UI38 385 aa5.48□□□□□ -1.53
HMGN1-218ENST00000490032 CFBP00751 764 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 GNAT2P19087 354 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 GYS2P54840 703 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 PPARAQ07869 468 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 MRPL49Q13405 166 aaKnown RBP5.47□□□□□ -1.53
HMGN1-218ENST00000490032 TRIM25Q14258 630 aaKnown RBP5.47□□□□□ -1.53
HMGN1-218ENST00000490032 ATP13A4Q4VNC1 1196 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 RABL3Q5HYI8 236 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 RNF180Q86T96 592 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 THNSL2Q86YJ6 484 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 GLB1L2Q8IW92 636 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 MSL3Q8N5Y2 521 aaKnown RBP5.47□□□□□ -1.53
HMGN1-218ENST00000490032 MB21D1Q8N884 522 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 CLIP3Q96DZ5 547 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 MENTQ9BUN1 341 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 ANO3Q9BYT9 981 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 SLC2A4RGQ9NR83 387 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 EVLQ9UI08 416 aaPredicted RBP5.47□□□□□ -1.53
HMGN1-218ENST00000490032 KCNG1Q9UIX4 513 aa5.47□□□□□ -1.53
HMGN1-218ENST00000490032 ZEB2O60315 1214 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 RAB11FIP3O75154 756 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 CASRP41180 1078 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 MEF2AQ02078 507 aaPredicted RBP5.46□□□□□ -1.54
HMGN1-218ENST00000490032 MGAT5Q09328 741 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 FAM214AQ32MH5 1076 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 LMBR1LQ6UX01 489 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 LDLRAD3Q86YD5 345 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 OR5M3Q8NGP4 307 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 OR14C36Q8NHC7 312 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 NEU4Q8WWR8 484 aaPredicted RBP5.46□□□□□ -1.54
HMGN1-218ENST00000490032 CHFRQ96EP1 664 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 IL17RAQ96F46 866 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 PRDM12Q9H4Q4 367 aa5.46□□□□□ -1.54
HMGN1-218ENST00000490032 REXO2Q9Y3B8 237 aaKnown RBP5.46□□□□□ -1.54
HMGN1-218ENST00000490032 NOC2LQ9Y3T9 749 aaKnown RBP5.46□□□□□ -1.54
HMGN1-218ENST00000490032 WDR33Q9C0J8 1336 aaKnown RBP5.46□□□□□ -1.54
HMGN1-218ENST00000490032 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.45□□□□□ -1.54
HMGN1-218ENST00000490032 TLDC2A0PJX2 215 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 LTA4HP09960 611 aaKnown RBP5.45□□□□□ -1.54
HMGN1-218ENST00000490032 CLEC2LP0C7M8 214 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 GZMKP49863 264 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 INHBCP55103 352 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 PDCD1Q15116 288 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 UBE3CQ15386 1083 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 C19orf54Q5BKX5 351 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 TAF7LQ5H9L4 462 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 PITRM1Q5JRX3 1037 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 CCDC62Q6P9F0 684 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 RHOUQ7L0Q8 258 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 DOK3Q7L591 496 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 ZNF627Q7L945 461 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 ULK2Q8IYT8 1036 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 OR52N2Q8NGI0 321 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 USP7Q93009 1102 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 PGBD4Q96DM1 585 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 LSM14BQ9BX40 385 aaKnown RBP5.45□□□□□ -1.54
HMGN1-218ENST00000490032 IFT22Q9H7X7 185 aa5.45□□□□□ -1.54
HMGN1-218ENST00000490032 CDY2AQ9Y6F7 541 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms