RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 KIF2CQ99661 725 aa21.64■■□□□ 1.05
TNFRSF1B-202ENST00000489921 ANKEF1Q9NU02 776 aa21.64■■□□□ 1.05
TNFRSF1B-202ENST00000489921 CDH22Q9UJ99 828 aa21.64■■□□□ 1.05
TNFRSF1B-202ENST00000489921 INPP5FQ9Y2H2 1132 aa21.64■■□□□ 1.05
TNFRSF1B-202ENST00000489921 HCFC2Q9Y5Z7 792 aa21.64■■□□□ 1.05
TNFRSF1B-202ENST00000489921 CXCL14O95715 111 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 SPATA31C1P0DKV0 1188 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 ARL2P36404 184 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 SLC11A1P49279 550 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 RARRES1P49788 294 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 AMHR2Q16671 573 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 DDX53Q86TM3 631 aaKnown RBP21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 AUTS2Q8WXX7 1259 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 PGBD4Q96DM1 585 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 FAM122AQ96E09 287 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 TMEM169Q96HH4 297 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 APOL5Q9BWW9 433 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 LIMCH1Q9UPQ0 1083 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 IRAK3Q9Y616 596 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 MUC6Q6W4X9 2439 aa21.63■■□□□ 1.05
TNFRSF1B-202ENST00000489921 ZNF318Q5VUA4 2279 aa21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 POTEMA6NI47 508 aa21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 TSPAN1O60635 241 aa21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 NCLP19338 710 aaKnown RBP21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 GUCY1B3Q02153 619 aa21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 POU5F1BQ06416 359 aa21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 CAPSQ13938 189 aa21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 MXD4Q14582 209 aaPredicted RBP21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 HFE2Q6ZVN8 426 aa21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 PIGOQ8TEQ8 1089 aa21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 EDAQ92838 391 aa21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 EIF2AQ9BY44 585 aaKnown RBP21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 RNF39Q9H2S5 420 aa21.62■■□□□ 1.05
TNFRSF1B-202ENST00000489921 DGAT1O75907 488 aa21.61■■□□□ 1.05
TNFRSF1B-202ENST00000489921 CTSAP10619 480 aa21.61■■□□□ 1.05
TNFRSF1B-202ENST00000489921 HOXB8P17481 243 aaPredicted RBP21.61■■□□□ 1.05
TNFRSF1B-202ENST00000489921 GLRA2P23416 452 aa21.61■■□□□ 1.05
TNFRSF1B-202ENST00000489921 MBTD1Q05BQ5 628 aa21.61■■□□□ 1.05
TNFRSF1B-202ENST00000489921 TRIM29Q14134 588 aa21.61■■□□□ 1.05
TNFRSF1B-202ENST00000489921 CCDC83Q8IWF9 413 aa21.61■■□□□ 1.05
TNFRSF1B-202ENST00000489921 CPB2Q96IY4 423 aa21.61■■□□□ 1.05
TNFRSF1B-202ENST00000489921 RPGRIP1Q96KN7 1286 aa21.61■■□□□ 1.05
TNFRSF1B-202ENST00000489921 GBP3Q9H0R5 595 aa21.61■■□□□ 1.05
TNFRSF1B-202ENST00000489921 RSAD1Q9HA92 442 aa21.61■■□□□ 1.05
TNFRSF1B-202ENST00000489921 INPPL1O15357 1258 aa21.6■■□□□ 1.05
TNFRSF1B-202ENST00000489921 EIF5BO60841 1220 aaKnown RBP21.6■■□□□ 1.05
TNFRSF1B-202ENST00000489921 SRGAP2BP0DMP2 458 aa21.6■■□□□ 1.05
TNFRSF1B-202ENST00000489921 XRCC6P12956 609 aaKnown RBP eCLIP21.6■■□□□ 1.05
TNFRSF1B-202ENST00000489921 MCM7P33993 719 aa21.6■■□□□ 1.05
TNFRSF1B-202ENST00000489921 RNASELQ05823 741 aaKnown RBP21.6■■□□□ 1.05
TNFRSF1B-202ENST00000489921 PCBP1Q15365 356 aaKnown RBP eCLIP21.6■■□□□ 1.05
TNFRSF1B-202ENST00000489921 CATSPER3Q86XQ3 398 aa21.6■■□□□ 1.05
TNFRSF1B-202ENST00000489921 FEZF2Q8TBJ5 459 aa21.6■■□□□ 1.05
TNFRSF1B-202ENST00000489921 CASP10Q92851 521 aa21.6■■□□□ 1.05
TNFRSF1B-202ENST00000489921 IPPQ9Y573 584 aa21.6■■□□□ 1.05
TNFRSF1B-202ENST00000489921 CNTNAP2Q9UHC6 1331 aa21.59■■□□□ 1.05
TNFRSF1B-202ENST00000489921 TDRD15B5MCY1 1934 aaKnown RBP21.59■■□□□ 1.05
TNFRSF1B-202ENST00000489921 LILRB3O75022 631 aa21.59■■□□□ 1.05
TNFRSF1B-202ENST00000489921 MED24O75448 989 aa21.59■■□□□ 1.05
TNFRSF1B-202ENST00000489921 ATP2B1P20020 1258 aa21.59■■□□□ 1.05
TNFRSF1B-202ENST00000489921 AXLP30530 894 aa21.59■■□□□ 1.05
TNFRSF1B-202ENST00000489921 SLC22A17Q8WUG5 538 aa21.59■■□□□ 1.05
TNFRSF1B-202ENST00000489921 LLPHQ9BRT6 129 aaKnown RBP21.59■■□□□ 1.05
TNFRSF1B-202ENST00000489921 NFKBIZQ9BYH8 718 aa21.59■■□□□ 1.05
TNFRSF1B-202ENST00000489921 ADAM7Q9H2U9 754 aa21.59■■□□□ 1.05
TNFRSF1B-202ENST00000489921 MIOSQ9NXC5 875 aa21.59■■□□□ 1.05
TNFRSF1B-202ENST00000489921 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 CARNS1A5YM72 827 aa21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 EFEMP2O95967 443 aa21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 POMCP01189 267 aa21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 ARF4P18085 180 aaPredicted RBP21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 ZXDAP98168 799 aa21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 KANK3Q6NY19 840 aa21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 URGCPQ8TCY9 931 aa21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 C8orf76Q96K31 380 aa21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 CSRNP2Q9H175 543 aa21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 GPRC5CQ9NQ84 441 aa21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 KANSL3Q9P2N6 904 aa21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 HES2Q9Y543 173 aa21.58■■□□□ 1.05
TNFRSF1B-202ENST00000489921 INO80B-WBP1J3KQ70 363 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 NRP1O14786 923 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 B4GALT5O43286 388 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 ERLIN2O94905 339 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 ITGA4P13612 1032 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 EPCAMP16422 314 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 TFDP1Q14186 410 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 PTPN14Q15678 1187 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 ZNF174Q15697 407 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 C8orf34Q49A92 452 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 NOTUMQ6P988 496 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 TRIM67Q6ZTA4 783 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 COLGALT2Q8IYK4 626 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 C12orf76Q8N812 135 aaPredicted RBP21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 C4orf32Q8N8J7 132 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 CNNM3Q8NE01 707 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 FBXO18Q8NFZ0 1043 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 CCDC51Q96ER9 411 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 TMEM175Q9BSA9 504 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 POLR3FQ9H1D9 316 aaPredicted RBP21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 FOXP1Q9H334 677 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms