RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 SMG8Q8ND04 991 aaKnown RBP21.14■□□□□ 0.97
EPHB4-207ENST00000489808 PRIMPOLQ96LW4 560 aa21.14■□□□□ 0.97
EPHB4-207ENST00000489808 USP28Q96RU2 1077 aa21.14■□□□□ 0.97
EPHB4-207ENST00000489808 EIF2AQ9BY44 585 aaKnown RBP21.14■□□□□ 0.97
EPHB4-207ENST00000489808 FBXO2Q9UK22 296 aaPredicted RBP21.14■□□□□ 0.97
EPHB4-207ENST00000489808 HIP1RO75146 1068 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 SSBP05455 408 aaKnown RBP eCLIP21.13■□□□□ 0.97
EPHB4-207ENST00000489808 GUCY2CP25092 1073 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 DNAJB1P25685 340 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 SLC12A3P55017 1021 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 SLC39A14Q15043 492 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 TIGD5Q53EQ6 642 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 NOMO2Q5JPE7 1267 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 KCNT2Q6UVM3 1135 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 SPRYD3Q8NCJ5 442 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 POF1BQ8WVV4 589 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 ATXN2LQ8WWM7 1075 aaKnown RBP21.13■□□□□ 0.97
EPHB4-207ENST00000489808 TIPINQ9BVW5 301 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 MRPL9Q9BYD2 267 aaKnown RBP21.13■□□□□ 0.97
EPHB4-207ENST00000489808 CCSER1Q9C0I3 900 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 COG5Q9UP83 839 aa21.13■□□□□ 0.97
EPHB4-207ENST00000489808 MORC2Q9Y6X9 1032 aaPredicted RBP21.13■□□□□ 0.97
EPHB4-207ENST00000489808 UNC80Q8N2C7 3258 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 ACKR2O00590 384 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 FGF18O76093 207 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 MAPK7Q13164 816 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 MAPK6Q16659 721 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 DRC1Q96MC2 740 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 KIFC3Q9BVG8 833 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 CCDC113Q9H0I3 377 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 RNF39Q9H2S5 420 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 NSUN3Q9H649 340 aaKnown RBP21.12■□□□□ 0.97
EPHB4-207ENST00000489808 UBN1Q9NPG3 1134 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 THEGQ9P2T0 379 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 IPPQ9Y573 584 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 ARID2Q68CP9 1835 aa21.12■□□□□ 0.97
EPHB4-207ENST00000489808 SPTBN5Q9NRC6 3674 aaKnown RBP21.11■□□□□ 0.97
EPHB4-207ENST00000489808 TTLL13PA6NNM8 815 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 SFI1A8K8P3 1242 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 PRKCBP05771 671 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 ITGA4P13612 1032 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 NPTX2P47972 431 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 EFNA5P52803 228 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 PEX3P56589 373 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 UBE3AQ05086 875 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 KARSQ15046 597 aaKnown RBP21.11■□□□□ 0.97
EPHB4-207ENST00000489808 TCEAL5Q5H9L2 206 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 SPECC1Q5M775 1068 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 SLC27A1Q6PCB7 646 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 USP49Q70CQ1 688 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 CDR2LQ86X02 465 aaPredicted RBP21.11■□□□□ 0.97
EPHB4-207ENST00000489808 THNSL1Q8IYQ7 743 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 HLA-CQ95604 372 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 EPSTI1Q96J88 318 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 ZNF558Q96NG5 402 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 CLIC6Q96NY7 704 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 RSAD1Q9HA92 442 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 C17orf75Q9HAS0 396 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 BLOC1S4Q9NUP1 217 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 KCND2Q9NZV8 630 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 INPP5FQ9Y2H2 1132 aa21.11■□□□□ 0.97
EPHB4-207ENST00000489808 CNTNAP2Q9UHC6 1331 aa21.1■□□□□ 0.97
EPHB4-207ENST00000489808 CCDC169A6NNP5 214 aa21.1■□□□□ 0.97
EPHB4-207ENST00000489808 ZSCAN22P10073 491 aaPredicted RBP21.1■□□□□ 0.97
EPHB4-207ENST00000489808 PLCG1P19174 1290 aa21.1■□□□□ 0.97
EPHB4-207ENST00000489808 NASPP49321 788 aaPredicted RBP21.1■□□□□ 0.97
EPHB4-207ENST00000489808 MRPS5P82675 430 aaKnown RBP21.1■□□□□ 0.97
EPHB4-207ENST00000489808 PLCB3Q01970 1234 aa21.1■□□□□ 0.97
EPHB4-207ENST00000489808 PRPF4BQ13523 1007 aaKnown RBP21.1■□□□□ 0.97
EPHB4-207ENST00000489808 ARSHQ5FYA8 562 aa21.1■□□□□ 0.97
EPHB4-207ENST00000489808 FOXD4L5Q5VV16 416 aaPredicted RBP21.1■□□□□ 0.97
EPHB4-207ENST00000489808 LRRC15Q8TF66 581 aa21.1■□□□□ 0.97
EPHB4-207ENST00000489808 FOXD4L4Q8WXT5 416 aaPredicted RBP21.1■□□□□ 0.97
EPHB4-207ENST00000489808 ZNF396Q96N95 335 aaPredicted RBP21.1■□□□□ 0.97
EPHB4-207ENST00000489808 NTPCRQ9BSD7 190 aaKnown RBP21.1■□□□□ 0.97
EPHB4-207ENST00000489808 TRIM6Q9C030 488 aaPredicted RBP21.1■□□□□ 0.97
EPHB4-207ENST00000489808 TBC1D13Q9NVG8 400 aa21.1■□□□□ 0.97
EPHB4-207ENST00000489808 SPG21Q9NZD8 308 aa21.1■□□□□ 0.97
EPHB4-207ENST00000489808 KANSL3Q9P2N6 904 aa21.1■□□□□ 0.97
EPHB4-207ENST00000489808 USP20Q9Y2K6 914 aa21.1■□□□□ 0.97
EPHB4-207ENST00000489808 HES2Q9Y543 173 aa21.1■□□□□ 0.97
EPHB4-207ENST00000489808 K7ERI5 159 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 NPTXRO95502 500 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 LIG1P18858 919 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 DDIT3P35638 169 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 PBX3P40426 434 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 ALDH7A1P49419 539 aaKnown RBP21.09■□□□□ 0.97
EPHB4-207ENST00000489808 AFF1P51825 1210 aaKnown RBP21.09■□□□□ 0.97
EPHB4-207ENST00000489808 BCAR1P56945 870 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 RAD51AP2Q09MP3 1159 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 DMP1Q13316 513 aaPredicted RBP21.09■□□□□ 0.97
EPHB4-207ENST00000489808 LINC00301Q8NCQ3 95 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 RASSF8Q8NHQ8 419 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 URGCPQ8TCY9 931 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 ASB2Q96Q27 587 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 TMEM134Q9H6X4 195 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 NRDE2Q9H7Z3 1164 aa21.09■□□□□ 0.97
EPHB4-207ENST00000489808 TFIP11Q9UBB9 837 aaKnown RBP21.09■□□□□ 0.97
EPHB4-207ENST00000489808 PUF60Q9UHX1 559 aaKnown RBP21.09■□□□□ 0.97
EPHB4-207ENST00000489808 KCNG1Q9UIX4 513 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms