RNA–Protein interactions for RNA: ENST00000489633.1

NEK2-204, Transcript of NIMA related kinase 2, humanhuman

TSL 2

Gene NEK2, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-204ENST00000489633 BMS1Q14692 1282 aaKnown RBP4.27□□□□□ -1.73
NEK2-204ENST00000489633 MAN2A1Q16706 1144 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 CFAP100Q494V2 611 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 TIGD2Q4W5G0 525 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 SOGA3Q5TF21 947 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 NXPE1Q8N323 547 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 OR5M3Q8NGP4 307 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 HIST1H2AHQ96KK5 128 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 FAM193BQ96PV7 902 aaPredicted RBP4.27□□□□□ -1.73
NEK2-204ENST00000489633 HIST1H2AJQ99878 128 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 OSBPL2Q9H1P3 480 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.27□□□□□ -1.73
NEK2-204ENST00000489633 ZNHIT2Q9UHR6 403 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 EIF2B4Q9UI10 523 aaKnown RBP4.27□□□□□ -1.73
NEK2-204ENST00000489633 PACSIN3Q9UKS6 424 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 CDK11AQ9UQ88 783 aaPredicted RBP4.27□□□□□ -1.73
NEK2-204ENST00000489633 HS3ST4Q9Y661 456 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 BICRAQ9NZM4 1560 aa4.27□□□□□ -1.73
NEK2-204ENST00000489633 MYPNQ86TC9 1320 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 CENPVL1A0A0U1RR11 272 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 AHRRA9YTQ3 701 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 MAFGO15525 162 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 LPXNO60711 386 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 DNAJC6O75061 913 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 RECQL4O94761 1208 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 RHOBTB3O94955 611 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 APOBEC3AP31941 199 aaPredicted RBP4.26□□□□□ -1.73
NEK2-204ENST00000489633 PLEKHG4Q58EX7 1191 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 XYLT1Q86Y38 959 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 BEND2Q8NDZ0 799 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 PPP1R14CQ8TAE6 165 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 VOPP1Q96AW1 172 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 LSM14BQ9BX40 385 aaKnown RBP4.26□□□□□ -1.73
NEK2-204ENST00000489633 KCNH6Q9H252 994 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 RIOX1Q9H6W3 641 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 USP18Q9UMW8 372 aa4.26□□□□□ -1.73
NEK2-204ENST00000489633 LCHNA4D1U4 455 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 ZNF891A8MT65 544 aaPredicted RBP4.25□□□□□ -1.73
NEK2-204ENST00000489633 TRIM24O15164 1050 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 B3GALT2O43825 422 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 ASMTLO95671 621 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 LY86O95711 162 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 GYPEP15421 78 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 LAG3P18627 525 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 IL12RB1P42701 662 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 PABPC4Q13310 644 aaKnown RBP eCLIP4.25□□□□□ -1.738e-7■■■■■ 32.1
NEK2-204ENST00000489633 VPS72Q15906 364 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 ZBTB41Q5SVQ8 909 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 HECTD2Q5U5R9 776 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 ZZZ3Q8IYH5 903 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 UNC5BQ8IZJ1 945 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 LILRA3Q8N6C8 439 aaPredicted RBP4.25□□□□□ -1.73
NEK2-204ENST00000489633 OR52N2Q8NGI0 321 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 SH3TC2Q8TF17 1288 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 CHTF18Q8WVB6 975 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 TRPM5Q9NZQ8 1165 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 ANKFY1Q9P2R3 1169 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.25□□□□□ -1.73
NEK2-204ENST00000489633 ZKSCAN5Q9Y2L8 839 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 PCDHB6Q9Y5E3 794 aa4.25□□□□□ -1.73
NEK2-204ENST00000489633 NRP1O14786 923 aa4.24□□□□□ -1.73
NEK2-204ENST00000489633 KPNA6O60684 536 aa4.24□□□□□ -1.73
NEK2-204ENST00000489633 CD40P25942 277 aa4.24□□□□□ -1.73
NEK2-204ENST00000489633 C21orf62-AS1Q17RA5 79 aa4.24□□□□□ -1.73
NEK2-204ENST00000489633 FAM83AQ86UY5 434 aa4.24□□□□□ -1.73
NEK2-204ENST00000489633 MSL3Q8N5Y2 521 aaKnown RBP4.24□□□□□ -1.73
NEK2-204ENST00000489633 GLB1L3Q8NCI6 653 aaPredicted RBP4.24□□□□□ -1.73
NEK2-204ENST00000489633 IL17RAQ96F46 866 aa4.24□□□□□ -1.73
NEK2-204ENST00000489633 ZNF496Q96IT1 587 aaPredicted RBP4.24□□□□□ -1.73
NEK2-204ENST00000489633 FDXACB1Q9BRP7 624 aaPredicted RBP4.24□□□□□ -1.73
NEK2-204ENST00000489633 NDC1Q9BTX1 674 aa4.24□□□□□ -1.73
NEK2-204ENST00000489633 MS4A5Q9H3V2 200 aa4.24□□□□□ -1.73
NEK2-204ENST00000489633 INTS7Q9NVH2 962 aaKnown RBP4.24□□□□□ -1.73
NEK2-204ENST00000489633 IFT57Q9NWB7 429 aa4.24□□□□□ -1.73
NEK2-204ENST00000489633 THG1LQ9NWX6 298 aaKnown RBP4.24□□□□□ -1.73
NEK2-204ENST00000489633 MSRAQ9UJ68 235 aa4.24□□□□□ -1.73
NEK2-204ENST00000489633 COL4A3Q01955 1670 aa4.24□□□□□ -1.73
NEK2-204ENST00000489633 LEFTY2O00292 366 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 TGM5O43548 720 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 GAS7O60861 476 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 NCR1O76036 304 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 F2P00734 622 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 PFKMP08237 780 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 MRPL49Q13405 166 aaKnown RBP4.23□□□□□ -1.73
NEK2-204ENST00000489633 CCDC142Q17RM4 750 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 OLFML1Q6UWY5 402 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 CDYL2Q8N8U2 506 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 NTN5Q8WTR8 489 aaPredicted RBP4.23□□□□□ -1.73
NEK2-204ENST00000489633 FERMT2Q96AC1 680 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 MYEOVQ96EZ4 313 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 PDCD2LQ9BRP1 358 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 SLC46A2Q9BY10 475 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 TEX101Q9BY14 249 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 WDR11Q9BZH6 1224 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 SYNPO2LQ9H987 977 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 CYP4F11Q9HBI6 524 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 HDAC5Q9UQL6 1122 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 PCSK5Q92824 1860 aa4.23□□□□□ -1.73
NEK2-204ENST00000489633 ST20-MTHFSA0A0A6YYL1 179 aa4.22□□□□□ -1.73
NEK2-204ENST00000489633 ZAR1LA6NP61 321 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms