RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 LAMTOR4Q0VGL1 99 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 MXD4Q14582 209 aaPredicted RBP11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 COL19A1Q14993 1142 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 TWF2Q6IBS0 349 aaKnown RBP11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 ZNF598Q86UK7 904 aaKnown RBP11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 CABP7Q86V35 215 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 CATSPER3Q86XQ3 398 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 LRRC43Q8N309 656 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 RNF169Q8NCN4 708 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 ERMNQ8TAM6 284 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 SPPL3Q8TCT6 385 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 PPP2R3CQ969Q6 453 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 PABPC5Q96DU9 382 aaKnown RBP11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 POLR3CQ9BUI4 534 aaPredicted RBP11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 TUFT1Q9NNX1 390 aa11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 ALG13Q9NP73 1137 aaKnown RBP11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 TYW1Q9NV66 732 aaKnown RBP11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 PIN4Q9Y237 131 aaKnown RBP11.7□□□□□ -0.54
SCAMP4-208ENST00000489554 TNFRSF10AO00220 468 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 ZBTB39O15060 712 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 SRGAP2CP0DJJ0 459 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 KCNA5P22460 613 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 RPA1P27694 616 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 DEKP35659 375 aaKnown RBP11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 PHKA2P46019 1235 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 RARRES1P49788 294 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 POU5F1BQ06416 359 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 TFDP1Q14186 410 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 PCBP1Q15365 356 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 KLHL40Q2TBA0 621 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 LEXMQ3ZCV2 418 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 L1TD1Q5T7N2 865 aaKnown RBP11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 COLGALT1Q8NBJ5 622 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 RNF149Q8NC42 400 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 SNX29Q8TEQ0 813 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 POF1BQ8WVV4 589 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 CASD1Q96PB1 797 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 MRPL9Q9BYD2 267 aaKnown RBP11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 CWH43Q9H720 699 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 XPNPEP1Q9NQW7 623 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 BLOC1S4Q9NUP1 217 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 AGPAT5Q9NUQ2 364 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 RNF19AQ9NV58 838 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 KCNH3Q9ULD8 1083 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 TTC28Q96AY4 2481 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 VCANP13611 3396 aa11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 SPTBN5Q9NRC6 3674 aaKnown RBP11.69□□□□□ -0.54
SCAMP4-208ENST00000489554 ARID2Q68CP9 1835 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 CARNS1A5YM72 827 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 GOLGA6L4A6NEF3 574 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 SLC26A4O43511 780 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 ZNF623O75123 536 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 FGF18O76093 207 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 ZNF202O95125 648 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 MBD3O95983 291 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 ATF7P17544 494 aaPredicted RBP11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 PLCG1P19174 1290 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 MUTP22033 750 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 PPM1AP35813 382 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 UBA7P41226 1012 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 CAMK1Q14012 370 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 PUS10Q3MIT2 529 aaKnown RBP11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 LONRF3Q496Y0 759 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 CLLU1OSQ5K130 101 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 HAUS3Q68CZ6 603 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 THNSL1Q8IYQ7 743 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 PDILTQ8N807 584 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 PIGOQ8TEQ8 1089 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 ZNF558Q96NG5 402 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 NACC1Q96RE7 527 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 PANK2Q9BZ23 570 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 RAB34Q9BZG1 259 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 FAM105AQ9NUU6 356 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 TMEM63CQ9P1W3 806 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 DBR1Q9UK59 544 aaKnown RBP11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 LZTS1Q9Y250 596 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
SCAMP4-208ENST00000489554 POLR2DO15514 142 aaKnown RBP11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 ERLIN2O94905 339 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 DNAJB1P25685 340 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 ARL2P36404 184 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 CCT6AP40227 531 aaKnown RBP11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 SYKP43405 635 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 PTENP60484 403 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 PLCB3Q01970 1234 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 NCBP1Q09161 790 aaKnown RBP11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 HYAL1Q12794 435 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 KRT79Q5XKE5 535 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 PDE12Q6L8Q7 609 aaKnown RBP11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 KCNT2Q6UVM3 1135 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 GLB1LQ6UWU2 654 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 KRBA2Q6ZNG9 492 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 CCDC73Q6ZRK6 1079 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 LRRC55Q6ZSA7 311 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 IFNLR1Q8IU57 520 aaPredicted RBP11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 MCPH1Q8NEM0 835 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 HELQQ8TDG4 1101 aa11.67□□□□□ -0.54
SCAMP4-208ENST00000489554 PGBD4Q96DM1 585 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms