RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 IGKV6D-41A0A0C4DH26 115 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 MAGEB6P1A0A0J9YX57 407 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 RIOK3O14730 519 aaKnown RBP8.79□□□□□ -1
EXOSC3-206ENST00000489414 HOXA2O43364 376 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 EXTL3O43909 919 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 SORBS3O60504 671 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 CD59P13987 128 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 BCAR1P56945 870 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 LSM11P83369 360 aaKnown RBP eCLIP8.79□□□□□ -1
EXOSC3-206ENST00000489414 WDR43Q15061 677 aaKnown RBP eCLIP8.79□□□□□ -1
EXOSC3-206ENST00000489414 TMEM266Q2M3C6 531 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 TRIM61Q5EBN2 209 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 ZNF746Q6NUN9 644 aaPredicted RBP8.79□□□□□ -1
EXOSC3-206ENST00000489414 ATG14Q6ZNE5 492 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 PLEKHM2Q8IWE5 1019 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 HDDC3Q8N4P3 179 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 BCL7CQ8WUZ0 217 aaPredicted RBP8.79□□□□□ -1
EXOSC3-206ENST00000489414 RNF25Q96BH1 459 aaPredicted RBP8.79□□□□□ -1
EXOSC3-206ENST00000489414 CAMK1GQ96NX5 476 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 PRKD2Q9BZL6 878 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 FAM117AQ9C073 453 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 ZDHHC7Q9NXF8 308 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 KIAA1522Q9P206 1035 aaPredicted RBP8.79□□□□□ -1
EXOSC3-206ENST00000489414 MBD1Q9UIS9 605 aaPredicted RBP8.79□□□□□ -1
EXOSC3-206ENST00000489414 PIAS3Q9Y6X2 628 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 ZMYM6O95789 1325 aa8.79□□□□□ -1
EXOSC3-206ENST00000489414 ADAMTS9Q9P2N4 1935 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 DENND3A2RUS2 1198 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 MBLAC1A4D2B0 266 aaPredicted RBP8.78□□□□□ -1
EXOSC3-206ENST00000489414 E9PAM4 449 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 DCLK1O15075 740 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 GLUD1P00367 558 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 MYBP10242 640 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 GRNP28799 593 aaKnown RBP8.78□□□□□ -1
EXOSC3-206ENST00000489414 STXBP2Q15833 593 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 IER5Q5VY09 327 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 ERICH6BQ5W0A0 696 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 PMS2CLQ68D20 193 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 CYP2U1Q7Z449 544 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 HDAC7Q8WUI4 952 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 IGSF21Q96ID5 467 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 GMCL1Q96IK5 515 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 PI4K2AQ9BTU6 479 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 NUSAP1Q9BXS6 441 aaKnown RBP8.78□□□□□ -1
EXOSC3-206ENST00000489414 RANBP17Q9H2T7 1088 aaKnown RBP8.78□□□□□ -1
EXOSC3-206ENST00000489414 TRPV5Q9NQA5 729 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 SEPT3Q9UH03 358 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 ISY1Q9ULR0 285 aaKnown RBP8.78□□□□□ -1
EXOSC3-206ENST00000489414 TRPV2Q9Y5S1 764 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 STK24Q9Y6E0 443 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 NOTCH4Q99466 2003 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 FANCIQ9NVI1 1328 aa8.78□□□□□ -1
EXOSC3-206ENST00000489414 GON4LQ3T8J9 2241 aa8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 GGPS1O95749 300 aa8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 RPLP2P05387 115 aaKnown RBP8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 CCNE1P24864 410 aa8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 NFX1Q12986 1120 aaKnown RBP8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 KARSQ15046 597 aaKnown RBP8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 TTC39AQ5SRH9 613 aa8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 C6orf132Q5T0Z8 1188 aa8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 GLRX5Q86SX6 157 aa8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 TRIM50Q86XT4 487 aa8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 KIF2CQ99661 725 aa8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 PLEKHB1Q9UF11 243 aaPredicted RBP8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 TUBE1Q9UJT0 475 aa8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 TNRC6BQ9UPQ9 1833 aaKnown RBP8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 CCDC171Q6TFL3 1326 aa8.77□□□□□ -1.01
EXOSC3-206ENST00000489414 AKAP9Q99996 3911 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 CSMD2Q7Z408 3487 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 SVILO95425 2214 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 MED13LQ71F56 2210 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 PCDH15Q96QU1 1955 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 DKK1O94907 266 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 ADH1AP07327 375 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 RASA1P20936 1047 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 SLC1A4P43007 532 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 SP2Q02086 613 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 NFATC3Q12968 1075 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 MAPK6Q16659 721 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 CLLU1OSQ5K130 101 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 DGKKQ5KSL6 1271 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 AGMOQ6ZNB7 445 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 GRASPQ7Z6J2 395 aaPredicted RBP8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 NPAS3Q8IXF0 933 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 ABI1Q8IZP0 508 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 CMTR1Q8N1G2 835 aaKnown RBP8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 SNIP1Q8TAD8 396 aaKnown RBP8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 BAP1Q92560 729 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 ZNF512BQ96KM6 892 aaPredicted RBP8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 IWS1Q96ST2 819 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 PLEKHA4Q9H4M7 779 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 BRD9Q9H8M2 597 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 LRRC4CQ9HCJ2 640 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 PCDHB9Q9Y5E1 797 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 KDM3AQ9Y4C1 1321 aa8.76□□□□□ -1.01
EXOSC3-206ENST00000489414 ANKHD1Q8IWZ3 2542 aaKnown RBP8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 APAF1O14727 1248 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 TEX28O15482 410 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 SH3BP5O60239 455 aa8.75□□□□□ -1.01
EXOSC3-206ENST00000489414 OPHN1O60890 802 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms