RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ADAMTS20P59510 1910 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 GREB1Q4ZG55 1949 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 MEIS3P2A8K0S8 358 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 CYTH3O43739 400 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 SOD2P04179 222 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 CXCL12P48061 93 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 RNF43Q68DV7 783 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 ZNF687Q8N1G0 1237 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 FAM227BQ96M60 508 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 SDF4Q9BRK5 362 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 ADAMTS10Q9H324 1103 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 SMOC1Q9H4F8 434 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 LMAN1LQ9HAT1 526 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 SSX2IPQ9Y2D8 614 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 DOCK6Q96HP0 2047 aa17.14■□□□□ 0.33
UFD1-209ENST00000489406 A0A0D9SFI3 127 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 BACH1O14867 736 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 MAFGO15525 162 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 DDHD2O94830 711 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 ALDH2P05091 517 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 PHKA2P46019 1235 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 CLCN3P51790 818 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 IFIT1BQ5T764 474 aaKnown RBP17.13■□□□□ 0.33
UFD1-209ENST00000489406 LONP2Q86WA8 852 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 RSPH1Q8WYR4 309 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 IER2Q9BTL4 223 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 HERC2P3Q9BVR0 1158 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 RXFP1Q9HBX9 757 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 AKT3Q9Y243 479 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 FAN1Q9Y2M0 1017 aa17.13■□□□□ 0.33
UFD1-209ENST00000489406 UNC79Q9P2D8 2635 aa17.12■□□□□ 0.33
UFD1-209ENST00000489406 PIK3CDO00329 1044 aa17.12■□□□□ 0.33
UFD1-209ENST00000489406 ZNF213O14771 459 aa17.12■□□□□ 0.33
UFD1-209ENST00000489406 TGM5O43548 720 aa17.12■□□□□ 0.33
UFD1-209ENST00000489406 OFD1O75665 1012 aa17.12■□□□□ 0.33
UFD1-209ENST00000489406 MCMDC2Q4G0Z9 681 aa17.12■□□□□ 0.33
UFD1-209ENST00000489406 TRMT1LQ7Z2T5 733 aaKnown RBP17.12■□□□□ 0.33
UFD1-209ENST00000489406 ZNF589Q86UQ0 364 aaPredicted RBP17.12■□□□□ 0.33
UFD1-209ENST00000489406 GLYCTKQ8IVS8 523 aa17.12■□□□□ 0.33
UFD1-209ENST00000489406 OTUD7AQ8TE49 926 aaPredicted RBP17.12■□□□□ 0.33
UFD1-209ENST00000489406 BBC3Q96PG8 261 aaPredicted RBP17.12■□□□□ 0.33
UFD1-209ENST00000489406 KCNH7Q9NS40 1196 aa17.12■□□□□ 0.33
UFD1-209ENST00000489406 IGKV6D-21A0A0A0MT36 114 aa17.11■□□□□ 0.33
UFD1-209ENST00000489406 EIF4E1BA6NMX2 242 aaKnown RBP17.11■□□□□ 0.33
UFD1-209ENST00000489406 NRP1O14786 923 aa17.11■□□□□ 0.33
UFD1-209ENST00000489406 CSDE1O75534 798 aaKnown RBP17.11■□□□□ 0.33
UFD1-209ENST00000489406 ZMYND10O75800 440 aa17.11■□□□□ 0.33
UFD1-209ENST00000489406 ATG7O95352 703 aa17.11■□□□□ 0.33
UFD1-209ENST00000489406 GLUD2P49448 558 aa17.11■□□□□ 0.33
UFD1-209ENST00000489406 FAM160B1Q5W0V3 765 aa17.11■□□□□ 0.33
UFD1-209ENST00000489406 PDXDC2PQ6P474 469 aa17.11■□□□□ 0.33
UFD1-209ENST00000489406 ITFG1Q8TB96 612 aa17.11■□□□□ 0.33
UFD1-209ENST00000489406 UBAC1Q9BSL1 405 aa17.11■□□□□ 0.33
UFD1-209ENST00000489406 PLA2G2FQ9BZM2 168 aa17.11■□□□□ 0.33
UFD1-209ENST00000489406 LAMA5O15230 3695 aa17.1■□□□□ 0.33
UFD1-209ENST00000489406 DARSP14868 501 aaKnown RBP17.1■□□□□ 0.33
UFD1-209ENST00000489406 SH3PXD2AQ5TCZ1 1133 aa17.1■□□□□ 0.33
UFD1-209ENST00000489406 CCDC60Q8IWA6 550 aaPredicted RBP17.1■□□□□ 0.33
UFD1-209ENST00000489406 ADAM32Q8TC27 787 aa17.1■□□□□ 0.33
UFD1-209ENST00000489406 SCLT1Q96NL6 688 aa17.1■□□□□ 0.33
UFD1-209ENST00000489406 MAP7D2Q96T17 732 aa17.1■□□□□ 0.33
UFD1-209ENST00000489406 PRG3Q9Y2Y8 225 aaPredicted RBP17.1■□□□□ 0.33
UFD1-209ENST00000489406 GPSM3Q9Y4H4 160 aa17.1■□□□□ 0.33
UFD1-209ENST00000489406 NFASCO94856 1347 aa17.1■□□□□ 0.33
UFD1-209ENST00000489406 MTCL1Q9Y4B5 1905 aaKnown RBP17.09■□□□□ 0.33
UFD1-209ENST00000489406 F5P12259 2224 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 MAN2B1O00754 1011 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 ATP4AP20648 1035 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 NT5C2P49902 561 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 ITGB3BPQ13352 177 aaPredicted RBP17.09■□□□□ 0.33
UFD1-209ENST00000489406 GAS6Q14393 721 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 GRM4Q14833 912 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 TWF2Q6IBS0 349 aaKnown RBP17.09■□□□□ 0.33
UFD1-209ENST00000489406 KIAA1211LQ6NV74 962 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 EFCAB12Q6NXP0 572 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 LILRA6Q6PI73 481 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 CKAP2LQ8IYA6 745 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 LRRC71Q8N4P6 559 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 FAM193BQ96PV7 902 aaPredicted RBP17.09■□□□□ 0.33
UFD1-209ENST00000489406 TMEM175Q9BSA9 504 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 ZNF302Q9NR11 478 aa17.09■□□□□ 0.33
UFD1-209ENST00000489406 C4orf47A7E2U8 309 aa17.08■□□□□ 0.32
UFD1-209ENST00000489406 DDX39AO00148 427 aaKnown RBP17.08■□□□□ 0.32
UFD1-209ENST00000489406 EPN2O95208 641 aa17.08■□□□□ 0.32
UFD1-209ENST00000489406 CCNE2O96020 404 aa17.08■□□□□ 0.32
UFD1-209ENST00000489406 COL28A1Q2UY09 1125 aa17.08■□□□□ 0.32
UFD1-209ENST00000489406 TCEAL6Q6IPX3 200 aa17.08■□□□□ 0.32
UFD1-209ENST00000489406 ABHD15Q6UXT9 468 aa17.08■□□□□ 0.32
UFD1-209ENST00000489406 URGCPQ8TCY9 931 aa17.08■□□□□ 0.32
UFD1-209ENST00000489406 TCEAL3Q969E4 200 aa17.08■□□□□ 0.32
UFD1-209ENST00000489406 CHST12Q9NRB3 414 aa17.08■□□□□ 0.32
UFD1-209ENST00000489406 MARCH5Q9NX47 278 aa17.08■□□□□ 0.32
UFD1-209ENST00000489406 POLIQ9UNA4 740 aa17.08■□□□□ 0.32
UFD1-209ENST00000489406 K7ESF4 209 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 MS4A1P11836 297 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 HOXC13P31276 330 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 GPC3P51654 580 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 AFF1P51825 1210 aaKnown RBP17.07■□□□□ 0.32
UFD1-209ENST00000489406 DSG1Q02413 1049 aa17.07■□□□□ 0.32
UFD1-209ENST00000489406 PLA2G2CQ5R387 149 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms