RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 EMILIN2Q9BXX0 1053 aa10.47□□□□□ -0.73
SSBP1-212ENST00000489378 MRPL9Q9BYD2 267 aaKnown RBP10.47□□□□□ -0.73
SSBP1-212ENST00000489378 A0A0U1RQF3 1178 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 FAM170BA6NMN3 283 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 CCER2I3L3R5 266 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 INPPL1O15357 1258 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 HBP1O60381 514 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 B4GALT3O60512 393 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 LILRB3O75022 631 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 RFPL2O75678 378 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 C22orf31O95567 290 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 GALTP07902 379 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 ZSCAN20P17040 1043 aaPredicted RBP10.46□□□□□ -0.74
SSBP1-212ENST00000489378 UBXN2BQ14CS0 331 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 N4BP2L1Q5TBK1 243 aaPredicted RBP10.46□□□□□ -0.74
SSBP1-212ENST00000489378 CYB5R4Q7L1T6 521 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 ZNF707Q96C28 371 aaPredicted RBP10.46□□□□□ -0.74
SSBP1-212ENST00000489378 ZNF668Q96K58 619 aaPredicted RBP10.46□□□□□ -0.74
SSBP1-212ENST00000489378 NRDE2Q9H7Z3 1164 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 SENP2Q9HC62 589 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 KCNH7Q9NS40 1196 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 DNAJB4Q9UDY4 337 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 RALGAPA1Q6GYQ0 2036 aa10.46□□□□□ -0.74
SSBP1-212ENST00000489378 COL1A2P08123 1366 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 FLNBO75369 2602 aaKnown RBP10.45□□□□□ -0.74
SSBP1-212ENST00000489378 IGKV6D-21A0A0A0MT36 114 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 GDF9O60383 454 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 PROS1P07225 676 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 CD72P21854 359 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 FGFR4P22455 802 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 SLC11A1P49279 550 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 SHC2P98077 582 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 ITGB3BPQ13352 177 aaPredicted RBP10.45□□□□□ -0.74
SSBP1-212ENST00000489378 MLF2Q15773 248 aaPredicted RBP10.45□□□□□ -0.74
SSBP1-212ENST00000489378 UBE2SQ16763 222 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 LONRF3Q496Y0 759 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 GET4Q7L5D6 327 aaPredicted RBP10.45□□□□□ -0.74
SSBP1-212ENST00000489378 METTL13Q8N6R0 699 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 SMG7Q92540 1137 aaKnown RBP10.45□□□□□ -0.74
SSBP1-212ENST00000489378 LPPQ93052 612 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 RHOBTB2Q9BYZ6 727 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 KRT23Q9C075 422 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 ADAMTS10Q9H324 1103 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 TBC1D13Q9NVG8 400 aa10.45□□□□□ -0.74
SSBP1-212ENST00000489378 NFASCO94856 1347 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 C2CD2LO14523 706 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 MAFGO15525 162 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 ATG7O95352 703 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 CCNE2O96020 404 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 ATP4AP20648 1035 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 SLC26A2P50443 739 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 CLCN3P51790 818 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 NLRP11P59045 1033 aaKnown RBP10.44□□□□□ -0.74
SSBP1-212ENST00000489378 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
SSBP1-212ENST00000489378 ZNF484Q5JVG2 852 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 CCDC60Q8IWA6 550 aaPredicted RBP10.44□□□□□ -0.74
SSBP1-212ENST00000489378 FGF14Q92915 247 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 SDF4Q9BRK5 362 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 GBP3Q9H0R5 595 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 LTB4R2Q9NPC1 389 aa10.44□□□□□ -0.74
SSBP1-212ENST00000489378 PRMT8Q9NR22 394 aaPredicted RBP10.44□□□□□ -0.74
SSBP1-212ENST00000489378 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.44□□□□□ -0.74
SSBP1-212ENST00000489378 F5P12259 2224 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 SDK1Q7Z5N4 2213 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 MEIS3P2A8K0S8 358 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 BACH1O14867 736 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 SPATA31D3P0C874 917 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 TROAPQ12815 778 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 KMT5BQ4FZB7 885 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 SLC44A4Q53GD3 710 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 LAIR1Q6GTX8 287 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 PARM1Q6UWI2 310 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 CYP26C1Q6V0L0 522 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 SPATA31D4Q6ZUB0 917 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 ZNF280BQ86YH2 543 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 CLDN23Q96B33 292 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 OSBPL6Q9BZF3 934 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 MRPL17Q9NRX2 175 aaKnown RBP10.43□□□□□ -0.74
SSBP1-212ENST00000489378 SEMA4GQ9NTN9 838 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 ZMIZ1Q9ULJ6 1067 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 INPP5FQ9Y2H2 1132 aa10.43□□□□□ -0.74
SSBP1-212ENST00000489378 C1QTNF9BB2RNN3 333 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 DDX39AO00148 427 aaKnown RBP10.42□□□□□ -0.74
SSBP1-212ENST00000489378 TEX28O15482 410 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 RETP07949 1114 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 C1QTNF9P0C862 333 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 TDGF1P13385 188 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 EIF4BP23588 611 aaKnown RBP10.42□□□□□ -0.74
SSBP1-212ENST00000489378 TARSP26639 723 aaKnown RBP10.42□□□□□ -0.74
SSBP1-212ENST00000489378 MAGEA9P43362 315 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 PDE1AP54750 535 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 AK2P54819 239 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 PRKCQQ04759 706 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 NOMO2Q5JPE7 1267 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 ZBTB41Q5SVQ8 909 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 PDXDC2PQ6P474 469 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 ABHD15Q6UXT9 468 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 PRR23CQ6ZRP0 262 aa10.42□□□□□ -0.74
SSBP1-212ENST00000489378 TRMT1LQ7Z2T5 733 aaKnown RBP10.42□□□□□ -0.74
SSBP1-212ENST00000489378 MXRA8Q9BRK3 442 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms