RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 KIR3DS1Q14943 382 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 TESK1Q15569 626 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 TMEM177Q53S58 311 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 RTP2Q5QGT7 225 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 RETSATQ6NUM9 610 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 CRTC3Q6UUV7 619 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 CYP26C1Q6V0L0 522 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 B3GNT8Q7Z7M8 397 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 DPP9Q86TI2 863 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 C11orf74Q86VG3 221 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 PTRH1Q86Y79 214 aaKnown RBP4.06□□□□□ -1.76
PRPF4-203ENST00000488937 DNAJC10Q8IXB1 793 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 EFHBQ8N7U6 833 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 IGSF22Q8N9C0 903 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 KREMEN2Q8NCW0 462 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 SSH1Q8WYL5 1049 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 CCT6BQ92526 530 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 JADE3Q92613 823 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 NELL2Q99435 816 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 ZFYVE21Q9BQ24 234 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 CDADC1Q9BWV3 514 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 GTPBP4Q9BZE4 634 aaKnown RBP4.06□□□□□ -1.76
PRPF4-203ENST00000488937 LRRC27Q9C0I9 530 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 MYLK2Q9H1R3 596 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 DBR1Q9UK59 544 aaKnown RBP4.06□□□□□ -1.76
PRPF4-203ENST00000488937 AKT3Q9Y243 479 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 INVSQ9Y283 1065 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 ZKSCAN5Q9Y2L8 839 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 NPFFR2Q9Y5X5 522 aa4.06□□□□□ -1.76
PRPF4-203ENST00000488937 WNT9AO14904 365 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 XPOTO43592 962 aaKnown RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 PQBP1O60828 265 aaKnown RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 CPP00450 1065 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 DBHP09172 617 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 POLD1P28340 1107 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 PPM1AP35813 382 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 MAPK9P45984 424 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 TERF1P54274 439 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 ADKP55263 362 aaKnown RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 KRTAP10-6P60371 365 aaPredicted RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 NUCB1Q02818 461 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 TNFAIP2Q03169 654 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 IFIT5Q13325 482 aaKnown RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 SURF1Q15526 300 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 TERF2Q15554 542 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 DDB1Q16531 1140 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 CDC37Q16543 378 aaPredicted RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 TBC1D10BQ4KMP7 808 aaPredicted RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 BROXQ5VW32 411 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 HLA-DQA1Q5Y7H0 255 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 FAM180BQ6P0A1 224 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 RSPO2Q6UXX9 243 aaPredicted RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 CCDC149Q6ZUS6 474 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 GET4Q7L5D6 327 aaPredicted RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 OTOP1Q7RTM1 612 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 OVCH1Q7RTY7 1134 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 TBC1D1Q86TI0 1168 aaPredicted RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 ZNF761Q86XN6 746 aaPredicted RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 CMIPQ8IY22 773 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 OR8H2Q8N162 312 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 FIBCD1Q8N539 461 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 FAM26EQ8N5C1 309 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 BRF1Q92994 677 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 RIPOR3Q96MK2 946 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 DSCC1Q9BVC3 393 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 SLC12A9Q9BXP2 914 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 BHMT2Q9H2M3 363 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 UNC45AQ9H3U1 944 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 CABP5Q9NP86 173 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 DMRT3Q9NQL9 472 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 SMYD2Q9NRG4 433 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 CCM2LQ9NUG4 571 aaPredicted RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 BLOC1S4Q9NUP1 217 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 RRN3Q9NYV6 651 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 TPCN1Q9ULQ1 816 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 L1RE1Q9UN81 338 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 DIS3Q9Y2L1 958 aaKnown RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 LRCH1Q9Y2L9 728 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 SF3B6Q9Y3B4 125 aaKnown RBP4.05□□□□□ -1.76
PRPF4-203ENST00000488937 PCDHGB6Q9Y5F9 930 aa4.05□□□□□ -1.76
PRPF4-203ENST00000488937 ZNF536O15090 1300 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 GOLIM4O00461 696 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 MEIS1O00470 390 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 TBC1D8O95759 1140 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 MYBP10242 640 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 TGFB3P10600 412 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 FXR1P51114 621 aaKnown RBP eCLIP4.04□□□□□ -1.76
PRPF4-203ENST00000488937 CASP5P51878 434 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 GPR85P60893 370 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 GUCY1A3Q02108 690 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 APBA1Q02410 837 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 DLX2Q07687 328 aaPredicted RBP4.04□□□□□ -1.76
PRPF4-203ENST00000488937 PRKG2Q13237 762 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 LLGL1Q15334 1064 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 PRSS53Q2L4Q9 553 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 NOL9Q5SY16 702 aaKnown RBP4.04□□□□□ -1.76
PRPF4-203ENST00000488937 BICRALQ6AI39 1079 aa4.04□□□□□ -1.76
PRPF4-203ENST00000488937 KCNT2Q6UVM3 1135 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms