RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 DSC3Q14574 896 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 HERC4Q5GLZ8 1057 aaPredicted RBP17.58■□□□□ 0.4
HDAC7-224ENST00000488927 SLC24A5Q71RS6 500 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 TMEM161BQ8NDZ6 487 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 KIFC3Q9BVG8 833 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 ST6GALNAC4Q9H4F1 302 aa17.58■□□□□ 0.4
HDAC7-224ENST00000488927 CXXC1Q9P0U4 656 aaPredicted RBP17.58■□□□□ 0.4
HDAC7-224ENST00000488927 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.57■□□□□ 0.4
HDAC7-224ENST00000488927 K7ENM7 598 aa17.57■□□□□ 0.4
HDAC7-224ENST00000488927 KINO60870 393 aaKnown RBP17.57■□□□□ 0.4
HDAC7-224ENST00000488927 GADD45BO75293 160 aaPredicted RBP17.57■□□□□ 0.4
HDAC7-224ENST00000488927 STAG3L1P0CL83 205 aa17.57■□□□□ 0.4
HDAC7-224ENST00000488927 ATP2A2P16615 1042 aaKnown RBP17.57■□□□□ 0.4
HDAC7-224ENST00000488927 RAB27AP51159 221 aa17.57■□□□□ 0.4
HDAC7-224ENST00000488927 ALCAMQ13740 583 aa17.57■□□□□ 0.4
HDAC7-224ENST00000488927 AMHR2Q16671 573 aa17.57■□□□□ 0.4
HDAC7-224ENST00000488927 TWF2Q6IBS0 349 aaKnown RBP17.57■□□□□ 0.4
HDAC7-224ENST00000488927 STXBP4Q6ZWJ1 553 aa17.57■□□□□ 0.4
HDAC7-224ENST00000488927 UNC13DQ70J99 1090 aa17.57■□□□□ 0.4
HDAC7-224ENST00000488927 HAUS6Q7Z4H7 955 aa17.57■□□□□ 0.4
HDAC7-224ENST00000488927 APBB1IPQ7Z5R6 666 aaPredicted RBP17.57■□□□□ 0.4
HDAC7-224ENST00000488927 SFR1Q86XK3 245 aa17.57■□□□□ 0.4
HDAC7-224ENST00000488927 ELOA2Q8IYF1 753 aaPredicted RBP17.57■□□□□ 0.4
HDAC7-224ENST00000488927 CCDC47Q96A33 483 aaKnown RBP17.57■□□□□ 0.4
HDAC7-224ENST00000488927 HVCN1Q96D96 273 aa17.57■□□□□ 0.4
HDAC7-224ENST00000488927 MRPL44Q9H9J2 332 aaKnown RBP17.57■□□□□ 0.4
HDAC7-224ENST00000488927 TET1Q8NFU7 2136 aa17.57■□□□□ 0.4
HDAC7-224ENST00000488927 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-224ENST00000488927 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-224ENST00000488927 MGEA5O60502 916 aa17.56■□□□□ 0.4
HDAC7-224ENST00000488927 HOXA11P31270 313 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-224ENST00000488927 SARSP49591 514 aaKnown RBP17.56■□□□□ 0.4
HDAC7-224ENST00000488927 CUL4BQ13620 913 aa17.56■□□□□ 0.4
HDAC7-224ENST00000488927 TMEM132AQ24JP5 1023 aa17.56■□□□□ 0.4
HDAC7-224ENST00000488927 LRIT3Q3SXY7 679 aa17.56■□□□□ 0.4
HDAC7-224ENST00000488927 RTN4RL1Q86UN2 441 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-224ENST00000488927 MYOCDQ8IZQ8 938 aa17.56■□□□□ 0.4
HDAC7-224ENST00000488927 LINC01599Q8WXQ3 324 aa17.56■□□□□ 0.4
HDAC7-224ENST00000488927 TOP1MTQ969P6 601 aa17.56■□□□□ 0.4
HDAC7-224ENST00000488927 MRPL4Q9BYD3 311 aaKnown RBP17.56■□□□□ 0.4
HDAC7-224ENST00000488927 BLZF1Q9H2G9 400 aa17.56■□□□□ 0.4
HDAC7-224ENST00000488927 ELAC1Q9H777 363 aaKnown RBP17.56■□□□□ 0.4
HDAC7-224ENST00000488927 A0A0U1RQF3 1178 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 A0A1B0GUA9 196 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 C9IYK1 514 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 N4BP3O15049 544 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 NR1I2O75469 434 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 ARF4P18085 180 aaPredicted RBP17.55■□□□□ 0.4
HDAC7-224ENST00000488927 LIG1P18858 919 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 FAM189BP81408 668 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 GTF2BQ00403 316 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 COASYQ13057 564 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 SLC27A1Q6PCB7 646 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.55■□□□□ 0.4
HDAC7-224ENST00000488927 ZNF720Q7Z2F6 126 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 NPAS4Q8IUM7 802 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 GRAMD1CQ8IYS0 662 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 FIZ1Q96SL8 496 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 ADPGKQ9BRR6 497 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 LRFN2Q9ULH4 789 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 TBX20Q9UMR3 447 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 PCDHB13Q9Y5F0 798 aa17.55■□□□□ 0.4
HDAC7-224ENST00000488927 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.54■□□□□ 0.4
HDAC7-224ENST00000488927 B4GALT5O43286 388 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 EOMESO95936 686 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 DEFB103AP81534 67 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 PSMD2Q13200 908 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 POSTNQ15063 836 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 HERC6Q8IVU3 1022 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 HACE1Q8IYU2 909 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 RSPH1Q8WYR4 309 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 ZBED2Q9BTP6 218 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 TRIM6Q9C030 488 aaPredicted RBP17.54■□□□□ 0.4
HDAC7-224ENST00000488927 EXOC1Q9NV70 894 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 TMEM161AQ9NX61 479 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 EXOC7Q9UPT5 735 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 PCDHB7Q9Y5E2 793 aa17.54■□□□□ 0.4
HDAC7-224ENST00000488927 HOXA2O43364 376 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 ZNF623O75123 536 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 GJB5O95377 273 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 GCNT3O95395 438 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 NMT1P30419 496 aaKnown RBP17.53■□□□□ 0.4
HDAC7-224ENST00000488927 SMAD3P84022 425 aaKnown RBP17.53■□□□□ 0.4
HDAC7-224ENST00000488927 DPYDQ12882 1025 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 FAM26FQ5R3K3 315 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 ATF7IP2Q5U623 682 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 ZPBP2Q6X784 338 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 TAS1R3Q7RTX0 852 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 PGBD4Q96DM1 585 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 CPB2Q96IY4 423 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 LMBRD1Q9NUN5 540 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 FAM105AQ9NUU6 356 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 TNFSF13BQ9Y275 285 aa17.53■□□□□ 0.4
HDAC7-224ENST00000488927 MICAL3Q7RTP6 2002 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 RANBP2P49792 3224 aaKnown RBP17.52■□□□□ 0.4
HDAC7-224ENST00000488927 SMC2O95347 1197 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 PIGRP01833 764 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 RPN1P04843 607 aaKnown RBP17.52■□□□□ 0.4
HDAC7-224ENST00000488927 CASP1P29466 404 aa17.52■□□□□ 0.4
HDAC7-224ENST00000488927 EHHADHQ08426 723 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms