RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 BRD1O95696 1058 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 PRKCBP05771 671 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 LAG3P18627 525 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 STAT6P42226 847 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 ME1P48163 572 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 SLC12A3P55017 1021 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 PEX3P56589 373 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 GRIN1Q05586 938 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 RNASELQ05823 741 aaKnown RBP14.22□□□□□ -0.13
PHF1-210ENST00000488767 GPM6BQ13491 265 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 DHX8Q14562 1220 aaKnown RBP14.22□□□□□ -0.13
PHF1-210ENST00000488767 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 GPBP1Q86WP2 473 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 MICALL1Q8N3F8 863 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 LARP4BQ92615 738 aaKnown RBP14.22□□□□□ -0.13
PHF1-210ENST00000488767 RAD54LQ92698 747 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 EPSTI1Q96J88 318 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 CLIC6Q96NY7 704 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 RUSC1Q9BVN2 902 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 ODF2LQ9ULJ1 636 aa14.22□□□□□ -0.13
PHF1-210ENST00000488767 MRPL42Q9Y6G3 142 aaKnown RBP14.22□□□□□ -0.13
PHF1-210ENST00000488767 C5orf67F2Z3F1 127 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 H3BNC9 293 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 ACKR2O00590 384 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 N4BP3O15049 544 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 CUTAO60888 179 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 FAM13AO94988 1023 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 ITGA4P13612 1032 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 SCP2P22307 547 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 HOXA11P31270 313 aaPredicted RBP14.21□□□□□ -0.13
PHF1-210ENST00000488767 ABCD1P33897 745 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 DDIT3P35638 169 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 NPTX2P47972 431 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 KRT85P78386 507 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 RAD51AP2Q09MP3 1159 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 STRN3Q13033 797 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 FAM187BQ17R55 369 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 SPECC1Q5M775 1068 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 ZNF598Q86UK7 904 aaKnown RBP14.21□□□□□ -0.13
PHF1-210ENST00000488767 HELQQ8TDG4 1101 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 PPM1EQ8WY54 764 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 P2RX5Q93086 422 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 CPB2Q96IY4 423 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 FZD8Q9H461 694 aa14.21□□□□□ -0.13
PHF1-210ENST00000488767 EPOPA6NHQ4 379 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 RFXAPO00287 272 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 PLS3P13797 630 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 ARF4P18085 180 aaPredicted RBP14.2□□□□□ -0.14
PHF1-210ENST00000488767 POU3F3P20264 500 aaPredicted RBP14.2□□□□□ -0.14
PHF1-210ENST00000488767 PPM1AP35813 382 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 GATMP50440 423 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 PKP1Q13835 747 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 ADGRE1Q14246 886 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 MCM6Q14566 821 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 SKIV2LQ15477 1246 aaKnown RBP14.2□□□□□ -0.14
PHF1-210ENST00000488767 AMHR2Q16671 573 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 TIGD5Q53EQ6 642 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 SV2BQ7L1I2 683 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 THNSL1Q8IYQ7 743 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 BSNDQ8WZ55 320 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 PPP2R3CQ969Q6 453 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 CASD1Q96PB1 797 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 FAM193BQ96PV7 902 aaPredicted RBP14.2□□□□□ -0.14
PHF1-210ENST00000488767 PYM1Q9BRP8 204 aaKnown RBP14.2□□□□□ -0.14
PHF1-210ENST00000488767 KIFC3Q9BVG8 833 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 LRRC27Q9C0I9 530 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 LMAN2LQ9H0V9 348 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 ZHX3Q9H4I2 956 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 RSAD1Q9HA92 442 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 PARVGQ9HBI0 331 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 TYW1Q9NV66 732 aaKnown RBP14.2□□□□□ -0.14
PHF1-210ENST00000488767 FAM13BQ9NYF5 915 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 KANSL3Q9P2N6 904 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 INPP5FQ9Y2H2 1132 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 CDH23Q9H251 3354 aa14.2□□□□□ -0.14
PHF1-210ENST00000488767 A0A1B0GUA9 196 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 B4GALT5O43286 388 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 ALDH7A1P49419 539 aaKnown RBP14.19□□□□□ -0.14
PHF1-210ENST00000488767 NUCB2P80303 420 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 KRT17Q04695 432 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 DNM1Q05193 864 aaKnown RBP14.19□□□□□ -0.14
PHF1-210ENST00000488767 DCAF4L1Q3SXM0 396 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 LONRF3Q496Y0 759 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 NOMO2Q5JPE7 1267 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 CLLU1OSQ5K130 101 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 SPRED2Q7Z698 418 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 MRPL10Q7Z7H8 261 aaKnown RBP14.19□□□□□ -0.14
PHF1-210ENST00000488767 MYCT1Q8N699 235 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 SLC17A8Q8NDX2 589 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 SPIRE2Q8WWL2 714 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 LPPQ93052 612 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 MRPL38Q96DV4 380 aaKnown RBP14.19□□□□□ -0.14
PHF1-210ENST00000488767 ZNF558Q96NG5 402 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 MRPL4Q9BYD3 311 aaKnown RBP14.19□□□□□ -0.14
PHF1-210ENST00000488767 TMEM134Q9H6X4 195 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 POLD4Q9HCU8 107 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 BLOC1S4Q9NUP1 217 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 PUF60Q9UHX1 559 aaKnown RBP14.19□□□□□ -0.14
PHF1-210ENST00000488767 IPPQ9Y573 584 aa14.19□□□□□ -0.14
PHF1-210ENST00000488767 MTCH2Q9Y6C9 303 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms