RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 LRRIQ4A6NIV6 560 aa21.28■■□□□ 1
CCM2-216ENST00000488727 PLS3P13797 630 aa21.28■■□□□ 1
CCM2-216ENST00000488727 DARSP14868 501 aaKnown RBP21.28■■□□□ 1
CCM2-216ENST00000488727 EIF4BP23588 611 aaKnown RBP21.28■■□□□ 1
CCM2-216ENST00000488727 NAMPTP43490 491 aa21.28■■□□□ 1
CCM2-216ENST00000488727 NPTX2P47972 431 aa21.28■■□□□ 1
CCM2-216ENST00000488727 UBASH3AP57075 661 aa21.28■■□□□ 1
CCM2-216ENST00000488727 TFDP1Q14186 410 aa21.28■■□□□ 1
CCM2-216ENST00000488727 CNNM4Q6P4Q7 775 aa21.28■■□□□ 1
CCM2-216ENST00000488727 DEFB128Q7Z7B8 93 aa21.28■■□□□ 1
CCM2-216ENST00000488727 GSDMAQ96QA5 445 aa21.28■■□□□ 1
CCM2-216ENST00000488727 LRRC27Q9C0I9 530 aa21.28■■□□□ 1
CCM2-216ENST00000488727 FANCLQ9NW38 375 aa21.28■■□□□ 1
CCM2-216ENST00000488727 NOC2LQ9Y3T9 749 aaKnown RBP21.28■■□□□ 1
CCM2-216ENST00000488727 TBCAO75347 108 aaKnown RBP21.27■■□□□ 1
CCM2-216ENST00000488727 FAM13AO94988 1023 aa21.27■■□□□ 1
CCM2-216ENST00000488727 PARNO95453 639 aaKnown RBP21.27■■□□□ 1
CCM2-216ENST00000488727 CXCL10P02778 98 aa21.27■■□□□ 1
CCM2-216ENST00000488727 ZNF18P17022 549 aa21.27■■□□□ 1
CCM2-216ENST00000488727 PTENP60484 403 aa21.27■■□□□ 1
CCM2-216ENST00000488727 DPYDQ12882 1025 aa21.27■■□□□ 1
CCM2-216ENST00000488727 DMP1Q13316 513 aaPredicted RBP21.27■■□□□ 1
CCM2-216ENST00000488727 IFT74Q96LB3 600 aa21.27■■□□□ 1
CCM2-216ENST00000488727 GCOM2Q9BZD3 368 aaPredicted RBP21.27■■□□□ 1
CCM2-216ENST00000488727 ZHX3Q9H4I2 956 aa21.27■■□□□ 1
CCM2-216ENST00000488727 C17orf75Q9HAS0 396 aa21.27■■□□□ 1
CCM2-216ENST00000488727 PARVGQ9HBI0 331 aa21.27■■□□□ 1
CCM2-216ENST00000488727 FRMD3A2A2Y4 597 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 IDEP14735 1019 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 FGFR4P22455 802 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 RFC2P35250 354 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 EPHB4P54760 987 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 ASIC1P78348 528 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 FPGSQ05932 587 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 POU5F1BQ06416 359 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 PPP2R5AQ15172 486 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 TCTN1Q2MV58 587 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 CDCA2Q69YH5 1023 aaPredicted RBP21.26■□□□□ 0.99
CCM2-216ENST00000488727 TSHZ1Q6ZSZ6 1077 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 FAM228AQ86W67 206 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 IFNLR1Q8IU57 520 aaPredicted RBP21.26■□□□□ 0.99
CCM2-216ENST00000488727 FIZ1Q96SL8 496 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 NFKBIZQ9BYH8 718 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 SQORQ9Y6N5 450 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 SERPINC1P01008 464 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 CD52P31358 61 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 MAGEA10P43363 369 aaPredicted RBP21.26■□□□□ 0.99
CCM2-216ENST00000488727 PHKA2P46019 1235 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 ODR4Q5SWX8 454 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 ARMCX5Q6P1M9 558 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 C16orf59Q7L2K0 433 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 SFR1Q86XK3 245 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 VSTM4Q8IW00 320 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 MYCT1Q8N699 235 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 LBHD1Q9BQE6 289 aaPredicted RBP21.26■□□□□ 0.99
CCM2-216ENST00000488727 PANK4Q9NVE7 773 aa21.26■□□□□ 0.99
CCM2-216ENST00000488727 LARSQ9P2J5 1176 aaKnown RBP21.26■□□□□ 0.99
CCM2-216ENST00000488727 CCDC169A6NNP5 214 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 SLC16A4O15374 487 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 GTPBP6O43824 516 aaPredicted RBP21.25■□□□□ 0.99
CCM2-216ENST00000488727 RPS6KA5O75582 802 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 ACRP10323 421 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 SFPQP23246 707 aaKnown RBP eCLIP21.25■□□□□ 0.99
CCM2-216ENST00000488727 MBTD1Q05BQ5 628 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 PLEKHG4Q58EX7 1191 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 SRGAP1Q7Z6B7 1085 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 USP38Q8NB14 1042 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 DEPTORQ8TB45 409 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 SPIRE2Q8WWL2 714 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 NTPCRQ9BSD7 190 aaKnown RBP21.25■□□□□ 0.99
CCM2-216ENST00000488727 IFIH1Q9BYX4 1025 aaKnown RBP21.25■□□□□ 0.99
CCM2-216ENST00000488727 IL23AQ9NPF7 189 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 KMT5AQ9NQR1 393 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 PADI3Q9ULW8 664 aa21.25■□□□□ 0.99
CCM2-216ENST00000488727 COASYQ13057 564 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 PPIGQ13427 754 aaKnown RBP eCLIP21.24■□□□□ 0.99
CCM2-216ENST00000488727 DBF4BQ8NFT6 615 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 ARHGAP28Q9P2N2 729 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 NFE2L3Q9Y4A8 694 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 NRDCO43847 1150 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 KLRC4O43908 158 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 MYL1P05976 194 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 NCKAP1LP55160 1127 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 PAK2Q13177 524 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 TPD52L1Q16890 204 aaPredicted RBP21.24■□□□□ 0.99
CCM2-216ENST00000488727 TMEM161BQ8NDZ6 487 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 CCDC113Q9H0I3 377 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 ERVK-5Q9HDB9 667 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 ST3GAL5Q9UNP4 418 aa21.24■□□□□ 0.99
CCM2-216ENST00000488727 INO80B-WBP1J3KQ70 363 aa21.23■□□□□ 0.99
CCM2-216ENST00000488727 GAP43P17677 238 aa21.23■□□□□ 0.99
CCM2-216ENST00000488727 EHHADHQ08426 723 aa21.23■□□□□ 0.99
CCM2-216ENST00000488727 NFX1Q12986 1120 aaKnown RBP21.23■□□□□ 0.99
CCM2-216ENST00000488727 UNC13DQ70J99 1090 aa21.23■□□□□ 0.99
CCM2-216ENST00000488727 TAS1R3Q7RTX0 852 aa21.23■□□□□ 0.99
CCM2-216ENST00000488727 CCDC65Q8IXS2 484 aa21.23■□□□□ 0.99
CCM2-216ENST00000488727 RPUSD2Q8IZ73 545 aaKnown RBP21.23■□□□□ 0.99
CCM2-216ENST00000488727 MED15Q96RN5 788 aa21.23■□□□□ 0.99
CCM2-216ENST00000488727 FGFBP2Q9BYJ0 223 aa21.23■□□□□ 0.99
CCM2-216ENST00000488727 INO80BQ9C086 356 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms