RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ARL8AQ96BM9 186 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 OR14A2Q96R54 314 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 RBM15Q96T37 977 aaKnown RBP eCLIP5.85□□□□□ -1.47
ITGB1-214ENST00000488427 DPYSL5Q9BPU6 564 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 MAGEL2Q9UJ55 1249 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 ZFR2Q9UPR6 939 aaKnown RBP5.85□□□□□ -1.47
ITGB1-214ENST00000488427 SLC30A1Q9Y6M5 507 aa5.85□□□□□ -1.47
ITGB1-214ENST00000488427 URB2Q14146 1524 aaKnown RBP5.84□□□□□ -1.47
ITGB1-214ENST00000488427 GAPVD1Q14C86 1478 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 ALDH1A2O94788 518 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 LTA4HP09960 611 aaKnown RBP5.84□□□□□ -1.47
ITGB1-214ENST00000488427 CLEC2LP0C7M8 214 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 GAAP10253 952 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 COMTP21964 271 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 SCAND1P57086 179 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 ATP2C1P98194 919 aaPredicted RBP5.84□□□□□ -1.47
ITGB1-214ENST00000488427 MGAT5Q09328 741 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 RIN1Q13671 783 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 CT83Q5H943 113 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 PITRM1Q5JRX3 1037 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 LIMS2Q7Z4I7 341 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 ANKRD35Q8N283 1001 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 EAF2Q96CJ1 260 aaPredicted RBP5.84□□□□□ -1.47
ITGB1-214ENST00000488427 TCF25Q9BQ70 676 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 PLA2G12BQ9BX93 195 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 IL23AQ9NPF7 189 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 DNAJC28Q9NX36 388 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 SPEF1Q9Y4P9 236 aa5.84□□□□□ -1.47
ITGB1-214ENST00000488427 IFT140Q96RY7 1462 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 PATE3B3GLJ2 98 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 ZNF623O75123 536 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 IPO13O94829 963 aaKnown RBP5.83□□□□□ -1.48
ITGB1-214ENST00000488427 LY86O95711 162 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 INSRRP14616 1297 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 HNRNPLP14866 589 aaKnown RBP eCLIP5.83□□□□□ -1.48
ITGB1-214ENST00000488427 GYPEP15421 78 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 MAGEA10P43363 369 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-214ENST00000488427 IGBP1P78318 339 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 AMPD3Q01432 767 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 DUSP2Q05923 314 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 GRM7Q14831 915 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 PDCD1Q15116 288 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 TBR1Q16650 682 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 TCTN3Q6NUS6 607 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 PDZD4Q76G19 769 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-214ENST00000488427 TAS1R1Q7RTX1 841 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 CMTM4Q8IZR5 234 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 CNTD1Q8N815 330 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.83□□□□□ -1.48
ITGB1-214ENST00000488427 DVL3Q92997 716 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-214ENST00000488427 ORAI2Q96SN7 254 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 CEP89Q96ST8 783 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 MS4A5Q9H3V2 200 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 HOMER2Q9NSB8 354 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 DPP7Q9UHL4 492 aa5.83□□□□□ -1.48
ITGB1-214ENST00000488427 SAP30BPQ9UHR5 308 aaKnown RBP5.83□□□□□ -1.48
ITGB1-214ENST00000488427 SYNJ1O43426 1573 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 C2orf78A6NCI8 922 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 GPR42O15529 346 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 PRAMEF4O60810 478 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 GASTP01350 101 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 POU3F3P20264 500 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-214ENST00000488427 ITKQ08881 620 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 PUM1Q14671 1186 aaKnown RBP eCLIP5.82□□□□□ -1.48
ITGB1-214ENST00000488427 C19orf54Q5BKX5 351 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 MUM1L1Q5H9M0 696 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 SYDE2Q5VT97 1194 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 BTNL9Q6UXG8 535 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 D2HGDHQ8N465 521 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 PRPF38AQ8NAV1 312 aaKnown RBP5.82□□□□□ -1.48
ITGB1-214ENST00000488427 DNERQ8NFT8 737 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 CFHR4Q92496 578 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 MTMR8Q96EF0 704 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 RPL10LQ96L21 214 aaKnown RBP5.82□□□□□ -1.48
ITGB1-214ENST00000488427 GNRHR2Q96P88 292 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 GPR20Q99678 358 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 ACE2Q9BYF1 805 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-214ENST00000488427 EPC1Q9H2F5 836 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 IFT122Q9HBG6 1241 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 TYW1Q9NV66 732 aaKnown RBP5.82□□□□□ -1.48
ITGB1-214ENST00000488427 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.82□□□□□ -1.48
ITGB1-214ENST00000488427 AURKAIP1Q9NWT8 199 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-214ENST00000488427 MKS1Q9NXB0 559 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 PLA2G3Q9NZ20 509 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 NCDNQ9UBB6 729 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 CLCA2Q9UQC9 943 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 MYRFQ9Y2G1 1151 aa5.82□□□□□ -1.48
ITGB1-214ENST00000488427 RPTORQ8N122 1335 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 A0A0A6YYK5 440 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-214ENST00000488427 A0A1W2PR48 441 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 LCHNA4D1U4 455 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 MFAP3LO75121 409 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 LPLP06858 475 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 KRT85P78386 507 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 CD69Q07108 199 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 MUM1Q2TAK8 710 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 MBNL2Q5VZF2 373 aaKnown RBP5.81□□□□□ -1.48
ITGB1-214ENST00000488427 COG1Q8WTW3 980 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 ZNF480Q8WV37 535 aa5.81□□□□□ -1.48
ITGB1-214ENST00000488427 CDC5LQ99459 802 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms