RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 EMC2Q15006 297 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 TARBP2Q15633 366 aaKnown RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 C1orf53Q5VUE5 145 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 CXCL17Q6UXB2 119 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 SLC9A9Q8IVB4 645 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 SYCP3Q8IZU3 236 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 PPP1R13LQ8WUF5 828 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 BBXQ8WY36 941 aaPredicted RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 BADQ92934 168 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 STARD7Q9NQZ5 370 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 AGPAT3Q9NRZ7 376 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 GRIN2DO15399 1336 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 EYSQ5T1H1 3165 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 NPTX2P47972 431 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 ADKP55263 362 aaKnown RBP13.92□□□□□ -0.18
NELFE-209ENST00000488426 NKX3-2P78367 333 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 NOLC1Q14978 699 aaKnown RBP eCLIP13.92□□□□□ -0.18
NELFE-209ENST00000488426 SYCP1Q15431 976 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 FIGNQ5HY92 759 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 CEP135Q66GS9 1140 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 TLK2Q86UE8 772 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 C12orf56Q8IXR9 622 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 EXOC8Q8IYI6 725 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 SLC7A3Q8WY07 619 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 GLG1Q92896 1179 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 KCNN1Q92952 543 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 IFT74Q96LB3 600 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 CEP89Q96ST8 783 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 NAA15Q9BXJ9 866 aaKnown RBP13.92□□□□□ -0.18
NELFE-209ENST00000488426 SMARCAD1Q9H4L7 1026 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 KMT5AQ9NQR1 393 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 KCND1Q9NSA2 647 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 DMAC2Q9NW81 257 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 ARMCX3Q9UH62 379 aaPredicted RBP13.92□□□□□ -0.18
NELFE-209ENST00000488426 EXOC7Q9UPT5 735 aa13.92□□□□□ -0.18
NELFE-209ENST00000488426 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.92□□□□□ -0.18
NELFE-209ENST00000488426 NKRFO15226 690 aaKnown RBP eCLIP13.91□□□□□ -0.18
NELFE-209ENST00000488426 SLC16A4O15374 487 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 GAS2O43903 313 aaKnown RBP13.91□□□□□ -0.18
NELFE-209ENST00000488426 STX10O60499 249 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 CASP14P31944 242 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 CDK7P50613 346 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 EPHB4P54760 987 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 IQSEC1Q6DN90 963 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 TMEM139Q8IV31 216 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 TMEM161BQ8NDZ6 487 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 ATP8B4Q8TF62 1192 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 BAG1Q99933 345 aaPredicted RBP13.91□□□□□ -0.18
NELFE-209ENST00000488426 POLR3FQ9H1D9 316 aaPredicted RBP13.91□□□□□ -0.18
NELFE-209ENST00000488426 MOXD2PA6NHM9 499 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 CCDC169A6NNP5 214 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 CLIC2O15247 247 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 ARHGAP6O43182 974 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 AKAP3O75969 853 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 FECHP22830 423 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 PSMC2P35998 433 aaKnown RBP13.91□□□□□ -0.18
NELFE-209ENST00000488426 GOLGA8FQ08AF8 430 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 GOLGA8DPQ0D2H9 430 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 PPP2R5AQ15172 486 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 FSCN1Q16658 493 aaKnown RBP13.91□□□□□ -0.18
NELFE-209ENST00000488426 C9orf50Q5SZB4 431 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 MAP4K3Q8IVH8 894 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 KSR1Q8IVT5 923 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 TDHQ8IZJ6 230 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 PPTC7Q8NI37 304 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 VTI1AQ96AJ9 217 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 CAPN11Q9UMQ6 739 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 SIK3Q9Y2K2 1263 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 SIP14410 1827 aa13.91□□□□□ -0.18
NELFE-209ENST00000488426 A0A0C4DFX4 3053 aa13.9□□□□□ -0.18
NELFE-209ENST00000488426 A0A1W2PQJ5 194 aa13.9□□□□□ -0.18
NELFE-209ENST00000488426 TRIM21P19474 475 aaKnown RBP13.9□□□□□ -0.18
NELFE-209ENST00000488426 DUSP28Q4G0W2 176 aa13.9□□□□□ -0.18
NELFE-209ENST00000488426 CPLX3Q8WVH0 158 aa13.9□□□□□ -0.18
NELFE-209ENST00000488426 BSNDQ8WZ55 320 aa13.9□□□□□ -0.18
NELFE-209ENST00000488426 GLT1D1Q96MS3 346 aa13.9□□□□□ -0.18
NELFE-209ENST00000488426 TTYH3Q9C0H2 523 aa13.9□□□□□ -0.18
NELFE-209ENST00000488426 ABHD10Q9NUJ1 306 aa13.9□□□□□ -0.18
NELFE-209ENST00000488426 TBX20Q9UMR3 447 aa13.9□□□□□ -0.18
NELFE-209ENST00000488426 FRMD4BQ9Y2L6 1034 aa13.9□□□□□ -0.18
NELFE-209ENST00000488426 LTBP2Q14767 1821 aa13.9□□□□□ -0.18
NELFE-209ENST00000488426 A0A1W2PPC1 479 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 DENND3A2RUS2 1198 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 MAFO75444 373 aaPredicted RBP13.89□□□□□ -0.19
NELFE-209ENST00000488426 CLTBP09497 229 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 ARL2P36404 184 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 NAMPTP43490 491 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 PLCB4Q15147 1175 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 SHHQ15465 462 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 ANKRD33Q7Z3H0 272 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 FAM186BQ8IYM0 893 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 PCSK9Q8NBP7 692 aaKnown RBP13.89□□□□□ -0.19
NELFE-209ENST00000488426 BORCS6Q96GS4 357 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 PCMTD1Q96MG8 357 aaPredicted RBP13.89□□□□□ -0.19
NELFE-209ENST00000488426 JPH2Q9BR39 696 aaPredicted RBP13.89□□□□□ -0.19
NELFE-209ENST00000488426 SPC25Q9HBM1 224 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 ERAP1Q9NZ08 941 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 ARHGAP28Q9P2N2 729 aa13.89□□□□□ -0.19
NELFE-209ENST00000488426 LUC7L2Q9Y383 392 aaKnown RBP13.89□□□□□ -0.19
NELFE-209ENST00000488426 TTC26A0AVF1 554 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms