RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 DHX15O43143 795 aaKnown RBP10.46□□□□□ -0.73
COL17A1-207ENST00000488320 DDHD2O94830 711 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 SFPQP23246 707 aaKnown RBP eCLIP10.46□□□□□ -0.73
COL17A1-207ENST00000488320 FSHRP23945 695 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 OR1G1P47890 313 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 CDC42EP1Q00587 391 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 ZNF746Q6NUN9 644 aaPredicted RBP10.46□□□□□ -0.73
COL17A1-207ENST00000488320 PARM1Q6UWI2 310 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 NIPA1Q7RTP0 329 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 TAS1R1Q7RTX1 841 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 CATSPER4Q7RTX7 472 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 RAB11FIP4Q86YS3 637 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 PLEKHM2Q8IWE5 1019 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 SMAP1Q8IYB5 467 aaPredicted RBP10.46□□□□□ -0.73
COL17A1-207ENST00000488320 TMTC2Q8N394 836 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 HDAC7Q8WUI4 952 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 TMEM175Q9BSA9 504 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 PRKD2Q9BZL6 878 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 PLEKHA4Q9H4M7 779 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 RIC8AQ9NPQ8 531 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 KANSL3Q9P2N6 904 aa10.46□□□□□ -0.73
COL17A1-207ENST00000488320 ZFP37Q9Y6Q3 630 aaPredicted RBP10.46□□□□□ -0.73
COL17A1-207ENST00000488320 MYH15Q9Y2K3 1946 aa10.46□□□□□ -0.74
COL17A1-207ENST00000488320 GPR179Q6PRD1 2367 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 RALGAPA1Q6GYQ0 2036 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 PATJQ8NI35 1801 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 A0A087WZ62 844 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 SMCO2A6NFE2 343 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 LILRB5O75023 590 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 POMCP01189 267 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 CALM1P0DP23 149 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 CALM2P0DP24 149 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 CALM3P0DP25 149 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 GLUD2P49448 558 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 DNM2P50570 870 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 RAB27AP51159 221 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 ADCY7P51828 1080 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 NRLP54845 237 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 ANTXR2P58335 489 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 PFKPQ01813 784 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 RSPO2Q6UXX9 243 aaPredicted RBP10.45□□□□□ -0.74
COL17A1-207ENST00000488320 PRR23BQ6ZRT6 265 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 MTSS1LQ765P7 747 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 GLYCTKQ8IVS8 523 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 LINC01465Q8N7H1 131 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 FGF14Q92915 247 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 ZNF707Q96C28 371 aaPredicted RBP10.45□□□□□ -0.74
COL17A1-207ENST00000488320 NELL2Q99435 816 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 FDXACB1Q9BRP7 624 aaPredicted RBP10.45□□□□□ -0.74
COL17A1-207ENST00000488320 HERC2P3Q9BVR0 1158 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 TRAIPQ9BWF2 469 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 OSBPL3Q9H4L5 887 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 LTB4R2Q9NPC1 389 aa10.45□□□□□ -0.74
COL17A1-207ENST00000488320 PRG3Q9Y2Y8 225 aaPredicted RBP10.45□□□□□ -0.74
COL17A1-207ENST00000488320 FAM86B1E9PN63 330 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 TGM5O43548 720 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 B4GALT3O60512 393 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 ZNF623O75123 536 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 NR1I2O75469 434 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 OATP04181 439 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 FAM86B2P0C5J1 330 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 SREBF1P36956 1147 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 HDAC1Q13547 482 aaPredicted RBP10.44□□□□□ -0.74
COL17A1-207ENST00000488320 WWC2Q6AWC2 1192 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 IL31Q6EBC2 164 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 GRASPQ7Z6J2 395 aaPredicted RBP10.44□□□□□ -0.74
COL17A1-207ENST00000488320 CELF5Q8N6W0 485 aaKnown RBP10.44□□□□□ -0.74
COL17A1-207ENST00000488320 DDX1Q92499 740 aaKnown RBP10.44□□□□□ -0.74
COL17A1-207ENST00000488320 DDX23Q9BUQ8 820 aaKnown RBP10.44□□□□□ -0.74
COL17A1-207ENST00000488320 FAM126AQ9BYI3 521 aaPredicted RBP10.44□□□□□ -0.74
COL17A1-207ENST00000488320 RSAD1Q9HA92 442 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 RXFP1Q9HBX9 757 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 ZDHHC7Q9NXF8 308 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 CDH7Q9ULB5 785 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 PCDHB2Q9Y5E7 798 aa10.44□□□□□ -0.74
COL17A1-207ENST00000488320 CHD6Q8TD26 2715 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 WDR64B1ANS9 1081 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 PRC1O43663 620 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 RETP07949 1114 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 AFF1P51825 1210 aaKnown RBP10.43□□□□□ -0.74
COL17A1-207ENST00000488320 PTH1RQ03431 593 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 AP3B2Q13367 1082 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 PPP2R5DQ14738 602 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 ACAP1Q15027 740 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 JAKMIP3Q5VZ66 844 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 LAIR1Q6GTX8 287 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 ZNF852Q6ZMS4 543 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 SYNE3Q6ZMZ3 975 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 AGMOQ6ZNB7 445 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 TPRG1Q6ZUI0 275 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 CHD1LQ86WJ1 897 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 RHPN2Q8IUC4 686 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 MB21D2Q8IYB1 491 aaPredicted RBP10.43□□□□□ -0.74
COL17A1-207ENST00000488320 RUFY2Q8WXA3 655 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 NELL1Q92832 810 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 GLT8D2Q9H1C3 349 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 IL25Q9H293 177 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 SEMA4GQ9NTN9 838 aa10.43□□□□□ -0.74
COL17A1-207ENST00000488320 FAM217BQ9NTX9 383 aaPredicted RBP10.43□□□□□ -0.74
COL17A1-207ENST00000488320 POLIQ9UNA4 740 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms