RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 DNAJC25Q9H1X3 360 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 ADAMTS10Q9H324 1103 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 FZD8Q9H461 694 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 TRMT13Q9NUP7 481 aaKnown RBP12.12□□□□□ -0.47
HDLBP-242ENST00000488013 TRPV2Q9Y5S1 764 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 HTTP42858 3142 aa12.12□□□□□ -0.47
HDLBP-242ENST00000488013 A0A087WZ62 844 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 HNRNPDLO14979 420 aaKnown RBP12.11□□□□□ -0.47
HDLBP-242ENST00000488013 CETN3O15182 167 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 GPR182O15218 404 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 MAP3K13O43283 966 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 GPR32O75388 356 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 ERLIN2O94905 339 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 PRPF6O94906 941 aaKnown RBP12.11□□□□□ -0.47
HDLBP-242ENST00000488013 MYBP10242 640 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 DARSP14868 501 aaKnown RBP12.11□□□□□ -0.47
HDLBP-242ENST00000488013 THPOP40225 353 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 LIG4P49917 911 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 SOX10P56693 466 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 ZNF200P98182 395 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-242ENST00000488013 RUFY4Q6ZNE9 571 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 SLC9A9Q8IVB4 645 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 C12orf56Q8IXR9 622 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 FAM126BQ8IXS8 530 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 SMYD4Q8IYR2 804 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-242ENST00000488013 HPS3Q969F9 1004 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 BICD1Q96G01 975 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 CEP63Q96MT8 703 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 FDXACB1Q9BRP7 624 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-242ENST00000488013 IFT122Q9HBG6 1241 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 KIAA1586Q9HCI6 787 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 POLD4Q9HCU8 107 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 MAPK8IP1Q9UQF2 711 aa12.11□□□□□ -0.47
HDLBP-242ENST00000488013 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-242ENST00000488013 B4GALT4O60513 344 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 TOM1L1O75674 476 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 CD4P01730 458 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 PRKCBP05771 671 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 GARTP22102 1010 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 CASP5P51878 434 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 POU5F1Q01860 360 aaKnown RBP12.1□□□□□ -0.47
HDLBP-242ENST00000488013 MBTD1Q05BQ5 628 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 SPAG1Q07617 926 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 PRPF4BQ13523 1007 aaKnown RBP12.1□□□□□ -0.47
HDLBP-242ENST00000488013 HIC1Q14526 733 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 KIZQ2M2Z5 673 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 UVSSAQ2YD98 709 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 ZC2HC1CQ53FD0 456 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-242ENST00000488013 USP37Q86T82 979 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 KSR1Q8IVT5 923 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 CSGALNACT2Q8N6G5 542 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 PAWRQ96IZ0 340 aaKnown RBP12.1□□□□□ -0.47
HDLBP-242ENST00000488013 KIFC3Q9BVG8 833 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 CCDC113Q9H0I3 377 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 TRPV6Q9H1D0 765 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 KCTD10Q9H3F6 313 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 THAP9Q9H5L6 903 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 CHST12Q9NRB3 414 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 CTNND2Q9UQB3 1225 aa12.1□□□□□ -0.47
HDLBP-242ENST00000488013 CLDN3O15551 220 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 PQBP1O60828 265 aaKnown RBP12.09□□□□□ -0.47
HDLBP-242ENST00000488013 LDHAP00338 332 aaKnown RBP12.09□□□□□ -0.47
HDLBP-242ENST00000488013 SELPP16109 830 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 TMEM132AQ24JP5 1023 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 ZCWPW2Q504Y3 356 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 TTI2Q6NXR4 508 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 TSHZ1Q6ZSZ6 1077 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 C11orf57Q6ZUT1 292 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-242ENST00000488013 CATSPER4Q7RTX7 472 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 NELFCDQ8IXH7 590 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 CTAGE1Q96RT6 745 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 ADPGKQ9BRR6 497 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 MKNK1Q9BUB5 465 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 CBX8Q9HC52 389 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 METTL14Q9HCE5 456 aaKnown RBP12.09□□□□□ -0.47
HDLBP-242ENST00000488013 AGPAT3Q9NRZ7 376 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 MAGEC2Q9UBF1 373 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-242ENST00000488013 GINS2Q9Y248 185 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 TNFSF13BQ9Y275 285 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 FRMD4BQ9Y2L6 1034 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 CDY2AQ9Y6F7 541 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 STYXL1Q9Y6J8 313 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 ADGRA3Q8IWK6 1321 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 CNTNAP2Q9UHC6 1331 aa12.09□□□□□ -0.47
HDLBP-242ENST00000488013 GOLGA6L3A6NEY3 463 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 N4BP3O15049 544 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 MAPK13O15264 365 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 SLC16A3O15427 465 aaKnown RBP12.08□□□□□ -0.48
HDLBP-242ENST00000488013 RPS6KA5O75582 802 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 NR3C1P04150 777 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 TPM2P07951 284 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 CKBP12277 381 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-242ENST00000488013 TLE2Q04725 743 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 ENPEPQ07075 957 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 ADAM9Q13443 819 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 TRIM71Q2Q1W2 868 aaKnown RBP12.08□□□□□ -0.48
HDLBP-242ENST00000488013 DCAF4L1Q3SXM0 396 aa12.08□□□□□ -0.48
HDLBP-242ENST00000488013 ATF7IP2Q5U623 682 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms