RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 PTENP60484 403 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 HMGN5P82970 282 aaKnown RBP12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 POTEGQ6S5H5 508 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 GLB1LQ6UWU2 654 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MRPL10Q7Z7H8 261 aaKnown RBP12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 NOSTRINQ8IVI9 506 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SMG8Q8ND04 991 aaKnown RBP12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PIGOQ8TEQ8 1089 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SUSD6Q92537 303 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 INPP5FQ9Y2H2 1132 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 DOCK8Q8NF50 2099 aa12.49□□□□□ -0.41
RAB11FIP3-210ENST00000487899 CNTNAP2Q9UHC6 1331 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 A0A087WWV3 80 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 USO1O60763 962 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 GPR37L1O60883 481 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 CD2BP2O95400 341 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 OR52Z1P0C646 297 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 NCLP19338 710 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ATP2B1P20020 1258 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ORC2Q13416 577 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MXD4Q14582 209 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 NBR1Q14596 966 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SAFBQ15424 915 aaKnown RBP eCLIP12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 NOMO2Q5JPE7 1267 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TTC38Q5R3I4 469 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TMEM184AQ6ZMB5 413 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 CATSPER3Q86XQ3 398 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ZNF280BQ86YH2 543 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 POP1Q99575 1024 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 EIF2AQ9BY44 585 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 NFKBIZQ9BYH8 718 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 POLR3FQ9H1D9 316 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 RSAD1Q9HA92 442 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 NGRNQ9NPE2 291 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 GPRC5CQ9NQ84 441 aa12.48□□□□□ -0.41
RAB11FIP3-210ENST00000487899 C2orf71A6NGG8 1288 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 LOC730098B7Z3J9 87 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 INPPL1O15357 1258 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ASAP2O43150 1006 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 B4GALT5O43286 388 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 DCXO43602 365 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ERLIN2O94905 339 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 GALTP07902 379 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ARF4P18085 180 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SLC11A1P49279 550 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 POU5F1BQ06416 359 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SMC1AQ14683 1233 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TMEM31Q5JXX7 168 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 CDCA2Q69YH5 1023 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 NOTUMQ6P988 496 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 SYCE2Q6PIF2 218 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 C4orf32Q8N8J7 132 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MICAL1Q8TDZ2 1067 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 AUTS2Q8WXX7 1259 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 BSNDQ8WZ55 320 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TMEM169Q96HH4 297 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 IGSF21Q96ID5 467 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 CPB2Q96IY4 423 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ZSCAN31Q96LW9 406 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 CCDC43Q96MW1 224 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 GBP3Q9H0R5 595 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 NXF3Q9H4D5 531 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TUFT1Q9NNX1 390 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 CDH22Q9UJ99 828 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 DBR1Q9UK59 544 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 HES2Q9Y543 173 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 IPPQ9Y573 584 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 HCFC2Q9Y5Z7 792 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MYO10Q9HD67 2058 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PIEZO1Q92508 2521 aa12.47□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ANK1P16157 1881 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ZMYM2Q9UBW7 1377 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 INO80B-WBP1J3KQ70 363 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 DDHD2O94830 711 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 EDN1P05305 212 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 U2AF2P26368 475 aaKnown RBP eCLIP12.46□□□□□ -0.411e-9■■■□□ 15.6
RAB11FIP3-210ENST00000487899 RPA1P27694 616 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TECP42680 631 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ALDH7A1P49419 539 aaKnown RBP12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TOB1P50616 345 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 KRT17Q04695 432 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TFDP1Q14186 410 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 CBX2Q14781 532 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PCBP1Q15365 356 aaKnown RBP eCLIP12.46□□□□□ -0.415e-7■■■■■ 47.5
RAB11FIP3-210ENST00000487899 ZNF174Q15697 407 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ANKRD54Q6NXT1 300 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 LLGL2Q6P1M3 1020 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 TMC7Q7Z402 723 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MRPL43Q8N983 215 aaKnown RBP12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PGBD4Q96DM1 585 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 CCDC51Q96ER9 411 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 ZFP42Q96MM3 310 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 POLR3CQ9BUI4 534 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 S1PR5Q9H228 398 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MARCH5Q9NX47 278 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 PUF60Q9UHX1 559 aaKnown RBP12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 MUTYHQ9UIF7 546 aa12.46□□□□□ -0.41
RAB11FIP3-210ENST00000487899 VPS13AQ96RL7 3174 aa12.46□□□□□ -0.42
RAB11FIP3-210ENST00000487899 DOCK6Q96HP0 2047 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms