RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 INSIG1O15503 277 aa3.84□□□□□ -1.79
USP9X-208ENST00000487625 KIR2DL3P43628 341 aa3.84□□□□□ -1.79
USP9X-208ENST00000487625 NASPP49321 788 aaPredicted RBP3.84□□□□□ -1.79
USP9X-208ENST00000487625 ZNF626Q68DY1 528 aa3.84□□□□□ -1.79
USP9X-208ENST00000487625 FSTL4Q6MZW2 842 aa3.84□□□□□ -1.79
USP9X-208ENST00000487625 Q6ZNX1 250 aa3.84□□□□□ -1.79
USP9X-208ENST00000487625 EP400NLQ6ZTU2 488 aa3.84□□□□□ -1.79
USP9X-208ENST00000487625 SYT12Q8IV01 421 aa3.84□□□□□ -1.79
USP9X-208ENST00000487625 GPRASP2Q96D09 838 aa3.84□□□□□ -1.79
USP9X-208ENST00000487625 HIRIP3Q9BW71 556 aaPredicted RBP3.84□□□□□ -1.79
USP9X-208ENST00000487625 C14orf93Q9H972 538 aaKnown RBP3.84□□□□□ -1.79
USP9X-208ENST00000487625 UNKLQ9H9P5 680 aaKnown RBP3.84□□□□□ -1.79
USP9X-208ENST00000487625 ACSS2Q9NR19 701 aa3.84□□□□□ -1.79
USP9X-208ENST00000487625 SCAMP3O14828 347 aaKnown RBP3.83□□□□□ -1.8
USP9X-208ENST00000487625 MTSS1O43312 755 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 PYGMP11217 842 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 VAMP1P23763 118 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 CCKARP32238 428 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 ALDH6A1Q02252 535 aaKnown RBP3.83□□□□□ -1.8
USP9X-208ENST00000487625 NHLH2Q02577 135 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 RESTQ13127 1097 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 DDB1Q16531 1140 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 DGKDQ16760 1214 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 FAM83AQ86UY5 434 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 CPLX3Q8WVH0 158 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 CATSPERZQ9NTU4 200 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 RNF181Q9P0P0 153 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 ZKSCAN5Q9Y2L8 839 aa3.83□□□□□ -1.8
USP9X-208ENST00000487625 DIRC3C9JPN6 131 aa3.82□□□□□ -1.8
USP9X-208ENST00000487625 FOXP2O15409 715 aa3.82□□□□□ -1.8
USP9X-208ENST00000487625 MOSPD3O75425 235 aa3.82□□□□□ -1.8
USP9X-208ENST00000487625 HNRNPLP14866 589 aaKnown RBP eCLIP3.82□□□□□ -1.8
USP9X-208ENST00000487625 GJA8P48165 433 aa3.82□□□□□ -1.8
USP9X-208ENST00000487625 MFAP1P55081 439 aaKnown RBP3.82□□□□□ -1.8
USP9X-208ENST00000487625 SLC10A6Q3KNW5 377 aa3.82□□□□□ -1.8
USP9X-208ENST00000487625 GPR149Q86SP6 731 aa3.82□□□□□ -1.8
USP9X-208ENST00000487625 ZDHHC17Q8IUH5 632 aa3.82□□□□□ -1.8
USP9X-208ENST00000487625 VGLL2Q8N8G2 317 aa3.82□□□□□ -1.8
USP9X-208ENST00000487625 HASPINQ8TF76 798 aa3.82□□□□□ -1.8
USP9X-208ENST00000487625 RPL36ALQ969Q0 106 aaKnown RBP3.82□□□□□ -1.8
USP9X-208ENST00000487625 WDR92Q96MX6 357 aa3.82□□□□□ -1.8
USP9X-208ENST00000487625 ZNF112Q9UJU3 913 aa3.82□□□□□ -1.8
USP9X-208ENST00000487625 RASGRP1O95267 797 aa3.81□□□□□ -1.8
USP9X-208ENST00000487625 HLA-DOAP06340 250 aa3.81□□□□□ -1.8
USP9X-208ENST00000487625 SNHG28P0DPA3 235 aa3.81□□□□□ -1.8
USP9X-208ENST00000487625 TUBA4AP68366 448 aa3.81□□□□□ -1.8
USP9X-208ENST00000487625 HDLBPQ00341 1268 aaKnown RBP3.81□□□□□ -1.8
USP9X-208ENST00000487625 PAK1Q13153 545 aa3.81□□□□□ -1.8
USP9X-208ENST00000487625 BTNL9Q6UXG8 535 aa3.81□□□□□ -1.8
USP9X-208ENST00000487625 DOK3Q7L591 496 aa3.81□□□□□ -1.8
USP9X-208ENST00000487625 NOSTRINQ8IVI9 506 aa3.81□□□□□ -1.8
USP9X-208ENST00000487625 FBXW5Q969U6 566 aa3.81□□□□□ -1.8
USP9X-208ENST00000487625 UROC1Q96N76 676 aa3.81□□□□□ -1.8
USP9X-208ENST00000487625 DNAI1Q9UI46 699 aa3.81□□□□□ -1.8
USP9X-208ENST00000487625 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.81□□□□□ -1.8
USP9X-208ENST00000487625 RTN4RL1Q86UN2 441 aaPredicted RBP3.8□□□□□ -1.8
USP9X-208ENST00000487625 NT5DC4Q86YG4 428 aa3.8□□□□□ -1.8
USP9X-208ENST00000487625 ACTRT2Q8TDY3 377 aa3.8□□□□□ -1.8
USP9X-208ENST00000487625 OSBP2Q969R2 916 aa3.8□□□□□ -1.8
USP9X-208ENST00000487625 FOXRED1Q96CU9 486 aaPredicted RBP3.8□□□□□ -1.8
USP9X-208ENST00000487625 FOXB1Q99853 325 aa3.8□□□□□ -1.8
USP9X-208ENST00000487625 POLR3BQ9NW08 1133 aaPredicted RBP3.8□□□□□ -1.8
USP9X-208ENST00000487625 FLRT1Q9NZU1 646 aa3.8□□□□□ -1.8
USP9X-208ENST00000487625 B4E1Z4 1266 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 SCDO00767 359 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 PRKCGP05129 697 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 PRR35P0CG20 571 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 POLGP54098 1239 aaPredicted RBP3.79□□□□□ -1.8
USP9X-208ENST00000487625 MRPS35P82673 323 aaKnown RBP3.79□□□□□ -1.8
USP9X-208ENST00000487625 HYAL1Q12794 435 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 AKNAD1Q5T1N1 836 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 LARP1BQ659C4 914 aaKnown RBP3.79□□□□□ -1.8
USP9X-208ENST00000487625 C16orf59Q7L2K0 433 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 GPRIN1Q7Z2K8 1008 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 PCDH19Q8TAB3 1148 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 DYDC2Q96IM9 177 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 EPC1Q9H2F5 836 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 KCNH7Q9NS40 1196 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 MDFICQ9P1T7 246 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 LRIT1Q9P2V4 623 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 BTBD3Q9Y2F9 522 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 TRAF6Q9Y4K3 522 aa3.79□□□□□ -1.8
USP9X-208ENST00000487625 IGKV2D-30A0A075B6S6 120 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 PRODHO43272 600 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 CDKL5O76039 1030 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 SDHAP31040 664 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 RGS3P49796 1198 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 FHL3Q13643 280 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 CATSPEREQ5SY80 951 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 Q6ZTC4 211 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 MEPCEQ7L2J0 689 aaKnown RBP3.78□□□□□ -1.8
USP9X-208ENST00000487625 XYLT1Q86Y38 959 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 ERCC4Q92889 916 aaPredicted RBP3.78□□□□□ -1.8
USP9X-208ENST00000487625 SARAFQ96BY9 339 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 ANAPC16Q96DE5 110 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 FPGT-TNNI3KV9GXZ4 949 aa3.78□□□□□ -1.8
USP9X-208ENST00000487625 ZBTB7CA1YPR0 619 aa3.77□□□□□ -1.81
USP9X-208ENST00000487625 AGRPO00253 132 aa3.77□□□□□ -1.81
USP9X-208ENST00000487625 DAPK3O43293 454 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms