RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 HIP1RO75146 1068 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 FGF18O76093 207 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 DNAJB1P25685 340 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 UBA7P41226 1012 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 RNASELQ05823 741 aaKnown RBP24.75■■□□□ 1.55
CDHR3-212ENST00000487084 NOMO2Q5JPE7 1267 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 TJAP1Q5JTD0 557 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 KCNT2Q6UVM3 1135 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 EP400NLQ6ZTU2 488 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 CDR2LQ86X02 465 aaPredicted RBP24.75■■□□□ 1.55
CDHR3-212ENST00000487084 SPRYD3Q8NCJ5 442 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 CALML4Q96GE6 196 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 APOL6Q9BWW8 343 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 CSRNP2Q9H175 543 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 RSAD1Q9HA92 442 aa24.75■■□□□ 1.55
CDHR3-212ENST00000487084 PRMT7Q9NVM4 692 aaPredicted RBP24.75■■□□□ 1.55
CDHR3-212ENST00000487084 OFD1O75665 1012 aa24.74■■□□□ 1.55
CDHR3-212ENST00000487084 MARCKSP29966 332 aaPredicted RBP24.74■■□□□ 1.55
CDHR3-212ENST00000487084 LONP1P36776 959 aaKnown RBP24.74■■□□□ 1.55
CDHR3-212ENST00000487084 RINT1Q6NUQ1 792 aa24.74■■□□□ 1.55
CDHR3-212ENST00000487084 AGMOQ6ZNB7 445 aa24.74■■□□□ 1.55
CDHR3-212ENST00000487084 MRPL10Q7Z7H8 261 aaKnown RBP24.74■■□□□ 1.55
CDHR3-212ENST00000487084 URGCPQ8TCY9 931 aa24.74■■□□□ 1.55
CDHR3-212ENST00000487084 ASB2Q96Q27 587 aa24.74■■□□□ 1.55
CDHR3-212ENST00000487084 GBP3Q9H0R5 595 aa24.74■■□□□ 1.55
CDHR3-212ENST00000487084 ZSCAN16Q9H4T2 348 aaPredicted RBP24.74■■□□□ 1.55
CDHR3-212ENST00000487084 IPPQ9Y573 584 aa24.74■■□□□ 1.55
CDHR3-212ENST00000487084 CNTNAP2Q9UHC6 1331 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 ZC3H11AO75152 810 aaKnown RBP eCLIP24.73■■□□□ 1.55
CDHR3-212ENST00000487084 NPTXRO95502 500 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 PRKCBP05771 671 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 ITGA4P13612 1032 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 NCLP19338 710 aaKnown RBP24.73■■□□□ 1.55
CDHR3-212ENST00000487084 RAD51AP2Q09MP3 1159 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 CAMK1Q14012 370 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 MAPK6Q16659 721 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 AAK1Q2M2I8 961 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 TMEM119Q4V9L6 283 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 FOXD4L5Q5VV16 416 aaPredicted RBP24.73■■□□□ 1.55
CDHR3-212ENST00000487084 PPP4R3CPQ6ZMV5 832 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 SMG8Q8ND04 991 aaKnown RBP24.73■■□□□ 1.55
CDHR3-212ENST00000487084 CNNM3Q8NE01 707 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 FOXD4L4Q8WXT5 416 aaPredicted RBP24.73■■□□□ 1.55
CDHR3-212ENST00000487084 RSPH1Q8WYR4 309 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 PRIMPOLQ96LW4 560 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 TBC1D13Q9NVG8 400 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 HES2Q9Y543 173 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 MYO7AQ13402 2215 aa24.73■■□□□ 1.55
CDHR3-212ENST00000487084 CCDC169A6NNP5 214 aa24.72■■□□□ 1.55
CDHR3-212ENST00000487084 DLL1O00548 723 aa24.72■■□□□ 1.55
CDHR3-212ENST00000487084 PLA2G4BP0C869 781 aa24.72■■□□□ 1.55
CDHR3-212ENST00000487084 IRS1P35568 1242 aa24.72■■□□□ 1.55
CDHR3-212ENST00000487084 PPM1AP35813 382 aa24.72■■□□□ 1.55
CDHR3-212ENST00000487084 PRPF4BQ13523 1007 aaKnown RBP24.72■■□□□ 1.55
CDHR3-212ENST00000487084 PTPAQ15257 358 aa24.72■■□□□ 1.55
CDHR3-212ENST00000487084 SLC27A1Q6PCB7 646 aa24.72■■□□□ 1.55
CDHR3-212ENST00000487084 C1orf186Q6ZWK4 172 aa24.72■■□□□ 1.55
CDHR3-212ENST00000487084 MICAL1Q8TDZ2 1067 aa24.72■■□□□ 1.55
CDHR3-212ENST00000487084 DRC1Q96MC2 740 aa24.72■■□□□ 1.55
CDHR3-212ENST00000487084 FZD8Q9H461 694 aa24.72■■□□□ 1.55
CDHR3-212ENST00000487084 UBE2ZQ9H832 354 aaPredicted RBP24.72■■□□□ 1.55
CDHR3-212ENST00000487084 NT5C1B-RDH14C9J2C7 533 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 ALDH7A1P49419 539 aaKnown RBP24.71■■□□□ 1.55
CDHR3-212ENST00000487084 PEX3P56589 373 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 BCAR1P56945 870 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 UBE3AQ05086 875 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 DMP1Q13316 513 aaPredicted RBP24.71■■□□□ 1.55
CDHR3-212ENST00000487084 KARSQ15046 597 aaKnown RBP24.71■■□□□ 1.55
CDHR3-212ENST00000487084 HACE1Q8IYU2 909 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 KCTD17Q8N5Z5 321 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 PPP2R3CQ969Q6 453 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 COL25A1Q9BXS0 654 aaPredicted RBP24.71■■□□□ 1.55
CDHR3-212ENST00000487084 NXF3Q9H4D5 531 aaKnown RBP24.71■■□□□ 1.55
CDHR3-212ENST00000487084 TLR9Q9NR96 1032 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 SPG21Q9NZD8 308 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 USP20Q9Y2K6 914 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 PCDHGC5Q9Y5F6 944 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 A0A0C4DFX4 3053 aa24.71■■□□□ 1.55
CDHR3-212ENST00000487084 REV3LO60673 3130 aa24.7■■□□□ 1.55
CDHR3-212ENST00000487084 A0A1B0GUA9 196 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 SLC26A4O43511 780 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 KCNQ1P51787 676 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 EFNA5P52803 228 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 KRT17Q04695 432 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 DHX8Q14562 1220 aaKnown RBP24.7■■□□□ 1.54
CDHR3-212ENST00000487084 FAM187BQ17R55 369 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 SPECC1Q5M775 1068 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 DAW1Q8N136 415 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 SYT2Q8N9I0 419 aaPredicted RBP24.7■■□□□ 1.54
CDHR3-212ENST00000487084 MRPS27Q92552 414 aaKnown RBP24.7■■□□□ 1.54
CDHR3-212ENST00000487084 USP28Q96RU2 1077 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 CCDC113Q9H0I3 377 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 RNF39Q9H2S5 420 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 IGFLR1Q9H665 355 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 UBN1Q9NPG3 1134 aa24.7■■□□□ 1.54
CDHR3-212ENST00000487084 PUF60Q9UHX1 559 aaKnown RBP24.7■■□□□ 1.54
CDHR3-212ENST00000487084 SPTBN5Q9NRC6 3674 aaKnown RBP24.7■■□□□ 1.54
CDHR3-212ENST00000487084 TTLL13PA6NNM8 815 aa24.69■■□□□ 1.54
CDHR3-212ENST00000487084 SFI1A8K8P3 1242 aa24.69■■□□□ 1.54
CDHR3-212ENST00000487084 ACKR2O00590 384 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms