RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PPP3CAQ08209 521 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 SNRNP35Q16560 246 aaKnown RBP22.11■■□□□ 1.13
HPS3-206ENST00000486530 MTERF2Q49AM1 385 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 EPC2Q52LR7 807 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 C1orf220Q5T0J3 134 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 OSBPL9Q96SU4 736 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 GPR88Q9GZN0 384 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 POLR3FQ9H1D9 316 aaPredicted RBP22.11■■□□□ 1.13
HPS3-206ENST00000486530 ZNF408Q9H9D4 720 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 ARFGAP3Q9NP61 516 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 RBPJLQ9UBG7 517 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 IGKV6D-21A0A0A0MT36 114 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 SOX10P56693 466 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 SNAPC2Q13487 334 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 EMC2Q15006 297 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 MPHOSPH6Q99547 160 aaKnown RBP22.11■■□□□ 1.13
HPS3-206ENST00000486530 TXNRD2Q9NNW7 524 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 FAM53CQ9NYF3 392 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 INTUQ9ULD6 942 aa22.11■■□□□ 1.13
HPS3-206ENST00000486530 ADGRA3Q8IWK6 1321 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 ZNF185O15231 689 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 ADRB2P07550 413 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 RHOXF2BP0C7M4 288 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 PNMA6AP0CW24 399 aaPredicted RBP22.1■■□□□ 1.13
HPS3-206ENST00000486530 OSBPP22059 807 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 SCP2P22307 547 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 GCLMP48507 274 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 MXI1P50539 228 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 POLGP54098 1239 aaPredicted RBP22.1■■□□□ 1.13
HPS3-206ENST00000486530 NEDD9Q14511 834 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 IFI16Q16666 785 aaKnown RBP22.1■■□□□ 1.13
HPS3-206ENST00000486530 ZNF572Q7Z3I7 529 aaPredicted RBP22.1■■□□□ 1.13
HPS3-206ENST00000486530 CREG2Q8IUH2 290 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 ZSWIM2Q8NEG5 633 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 PLEKHO2Q8TD55 490 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 ZNF526Q8TF50 670 aaPredicted RBP22.1■■□□□ 1.13
HPS3-206ENST00000486530 RHOXF2Q9BQY4 288 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 R3HDMLQ9H3Y0 253 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 ARHGAP28Q9P2N2 729 aa22.1■■□□□ 1.13
HPS3-206ENST00000486530 PALMO75781 387 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 FARP2O94887 1054 aaPredicted RBP22.09■■□□□ 1.13
HPS3-206ENST00000486530 TGFB3P10600 412 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 ITIH3Q06033 890 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 Q3C1V9 767 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 BRDTQ58F21 947 aaPredicted RBP22.09■■□□□ 1.13
HPS3-206ENST00000486530 PHLDB3Q6NSJ2 640 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 HNRNPLLQ8WVV9 542 aaKnown RBP22.09■■□□□ 1.13
HPS3-206ENST00000486530 KCNN1Q92952 543 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 FBXL18Q96ME1 805 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 PNKPQ96T60 521 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 TLR10Q9BXR5 811 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 USP20Q9Y2K6 914 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 GOLGA8IPA6NC78 632 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 GOLGA8JA6NMD2 632 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 DDX3XO00571 662 aaKnown RBP eCLIP22.09■■□□□ 1.135e-8■■■■□ 22.3
HPS3-206ENST00000486530 ERLIN1O75477 346 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 ATP4AP20648 1035 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 GARTP22102 1010 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 CBX1P83916 185 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 ENPEPQ07075 957 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 NFRKBQ6P4R8 1299 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 SLC39A4Q6P5W5 647 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 USP37Q86T82 979 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 CBWD2Q8IUF1 395 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 KRT222Q8N1A0 295 aa22.09■■□□□ 1.13
HPS3-206ENST00000486530 NIFKQ9BYG3 293 aaKnown RBP22.09■■□□□ 1.13
HPS3-206ENST00000486530 PDE2AO00408 941 aaPredicted RBP22.08■■□□□ 1.13
HPS3-206ENST00000486530 HNRNPDLO14979 420 aaKnown RBP22.08■■□□□ 1.13
HPS3-206ENST00000486530 SEC31AO94979 1220 aaKnown RBP22.08■■□□□ 1.13
HPS3-206ENST00000486530 SLC30A5Q8TAD4 765 aa22.08■■□□□ 1.13
HPS3-206ENST00000486530 TMC2Q8TDI7 906 aa22.08■■□□□ 1.13
HPS3-206ENST00000486530 POMGNT1Q8WZA1 660 aa22.08■■□□□ 1.13
HPS3-206ENST00000486530 SAAL1Q96ER3 474 aa22.08■■□□□ 1.13
HPS3-206ENST00000486530 TMEM117Q9H0C3 514 aa22.08■■□□□ 1.13
HPS3-206ENST00000486530 DHX33Q9H6R0 707 aaKnown RBP22.08■■□□□ 1.13
HPS3-206ENST00000486530 H2AFZP0C0S5 128 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 KIF22Q14807 665 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 FAM160B1Q5W0V3 765 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 WDR93Q6P2C0 686 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 H2AFVQ71UI9 128 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 COG1Q8WTW3 980 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 SYT11Q9BT88 431 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 A0A0A6YYK5 440 aaPredicted RBP22.07■■□□□ 1.12
HPS3-206ENST00000486530 GSTTP1A0A1W2PQM5 241 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 NCK2O43639 380 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 FKBP1BP68106 108 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 ARHGAP44Q17R89 818 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 OLIG1Q8TAK6 271 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 LNX1Q8TBB1 728 aaPredicted RBP22.07■■□□□ 1.12
HPS3-206ENST00000486530 AFAP1L1Q8TED9 768 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 PARD3BQ8TEW8 1205 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 BICD1Q96G01 975 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 MS4A4AQ96JQ5 239 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 MFSD14AQ96MC6 490 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 PORCNQ9H237 461 aa22.07■■□□□ 1.12
HPS3-206ENST00000486530 UBE2TQ9NPD8 197 aaPredicted RBP22.07■■□□□ 1.12
HPS3-206ENST00000486530 ZNFX1Q9P2E3 1918 aaKnown RBP22.06■■□□□ 1.12
HPS3-206ENST00000486530 TARSL2A2RTX5 802 aaKnown RBP22.06■■□□□ 1.12
HPS3-206ENST00000486530 GRID2IPA4D2P6 1211 aa22.06■■□□□ 1.12
HPS3-206ENST00000486530 MCM3P25205 808 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms