RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 FOXK2Q01167 660 aa19.65■□□□□ 0.74
MCF2L-226ENST00000486210 DNM1Q05193 864 aaKnown RBP19.65■□□□□ 0.74
MCF2L-226ENST00000486210 PTGDRQ13258 359 aa19.65■□□□□ 0.74
MCF2L-226ENST00000486210 ORC2Q13416 577 aaPredicted RBP19.65■□□□□ 0.74
MCF2L-226ENST00000486210 ZNF598Q86UK7 904 aaKnown RBP19.65■□□□□ 0.74
MCF2L-226ENST00000486210 C12orf76Q8N812 135 aaPredicted RBP19.65■□□□□ 0.74
MCF2L-226ENST00000486210 ZNF668Q96K58 619 aaPredicted RBP19.65■□□□□ 0.74
MCF2L-226ENST00000486210 GABBR1Q9UBS5 961 aa19.65■□□□□ 0.74
MCF2L-226ENST00000486210 SPTBN4Q9H254 2564 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 NT5C1B-RDH14C9J2C7 533 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 TBX3O15119 743 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 PSMD10O75832 226 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 PTPAQ15257 358 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 RARS2Q5T160 578 aaKnown RBP19.64■□□□□ 0.73
MCF2L-226ENST00000486210 ASTLQ6HA08 431 aaPredicted RBP19.64■□□□□ 0.73
MCF2L-226ENST00000486210 ZDHHC14Q8IZN3 488 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 ABI1Q8IZP0 508 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 ZNF710Q8N1W2 664 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 HELQQ8TDG4 1101 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 FAM20AQ96MK3 541 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 NRBP2Q9NSY0 501 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 AKT3Q9Y243 479 aa19.64■□□□□ 0.73
MCF2L-226ENST00000486210 GAS7O60861 476 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 OR52Z1P0C646 297 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 ZSCAN20P17040 1043 aaPredicted RBP19.63■□□□□ 0.73
MCF2L-226ENST00000486210 FGFR4P22455 802 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 EIF4BP23588 611 aaKnown RBP19.63■□□□□ 0.73
MCF2L-226ENST00000486210 TXKP42681 527 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 MTHFRP42898 656 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 ATP2C1P98194 919 aaPredicted RBP19.63■□□□□ 0.73
MCF2L-226ENST00000486210 IL17AQ16552 155 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 LRCH2Q5VUJ6 765 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 CWF19L1Q69YN2 538 aaKnown RBP19.63■□□□□ 0.73
MCF2L-226ENST00000486210 KIAA1841Q6NSI8 718 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 EFCAB12Q6NXP0 572 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 TMEM173Q86WV6 379 aaPredicted RBP19.63■□□□□ 0.73
MCF2L-226ENST00000486210 LRRC71Q8N4P6 559 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 RNF169Q8NCN4 708 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 RIT2Q99578 217 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 TEKT3Q9BXF9 490 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 LIMD1Q9UGP4 676 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 FAM186AA6NE01 2351 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 C2orf16Q68DN1 1984 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 VPS13AQ96RL7 3174 aa19.63■□□□□ 0.73
MCF2L-226ENST00000486210 A0A0U1RQF3 1178 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 MARCH6O60337 910 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 BAG4O95429 457 aaKnown RBP19.62■□□□□ 0.73
MCF2L-226ENST00000486210 EPCAMP16422 314 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 SFNP31947 248 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 JAK3P52333 1124 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 BCAR1P56945 870 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 B3GNT9Q6UX72 402 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 FRMD5Q7Z6J6 570 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 TDRD5Q8NAT2 981 aaKnown RBP19.62■□□□□ 0.73
MCF2L-226ENST00000486210 AUTS2Q8WXX7 1259 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 ZNF396Q96N95 335 aaPredicted RBP19.62■□□□□ 0.73
MCF2L-226ENST00000486210 SCLT1Q96NL6 688 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 ZBP1Q9H171 429 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 UNC45AQ9H3U1 944 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 DISC1Q9NRI5 854 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 VAV3Q9UKW4 847 aa19.62■□□□□ 0.73
MCF2L-226ENST00000486210 RIF1Q5UIP0 2472 aaKnown RBP19.61■□□□□ 0.73
MCF2L-226ENST00000486210 CXCL14O95715 111 aa19.61■□□□□ 0.73
MCF2L-226ENST00000486210 OATP04181 439 aa19.61■□□□□ 0.73
MCF2L-226ENST00000486210 CA8P35219 290 aa19.61■□□□□ 0.73
MCF2L-226ENST00000486210 NASPP49321 788 aaPredicted RBP19.61■□□□□ 0.73
MCF2L-226ENST00000486210 GPC3P51654 580 aa19.61■□□□□ 0.73
MCF2L-226ENST00000486210 SLFN12Q8IYM2 578 aa19.61■□□□□ 0.73
MCF2L-226ENST00000486210 TTC12Q9H892 705 aaPredicted RBP19.61■□□□□ 0.73
MCF2L-226ENST00000486210 EML1O00423 815 aa19.6■□□□□ 0.73
MCF2L-226ENST00000486210 CHMP2AO43633 222 aa19.6■□□□□ 0.73
MCF2L-226ENST00000486210 ZNF862O60290 1169 aa19.6■□□□□ 0.73
MCF2L-226ENST00000486210 EOMESO95936 686 aa19.6■□□□□ 0.73
MCF2L-226ENST00000486210 DARSP14868 501 aaKnown RBP19.6■□□□□ 0.73
MCF2L-226ENST00000486210 MARCKSP29966 332 aaPredicted RBP19.6■□□□□ 0.73
MCF2L-226ENST00000486210 CLCN5P51795 746 aa19.6■□□□□ 0.73
MCF2L-226ENST00000486210 SPIRE1Q08AE8 756 aa19.6■□□□□ 0.73
MCF2L-226ENST00000486210 VPS52Q8N1B4 723 aa19.6■□□□□ 0.73
MCF2L-226ENST00000486210 LINC00301Q8NCQ3 95 aa19.6■□□□□ 0.73
MCF2L-226ENST00000486210 SLC22A17Q8WUG5 538 aa19.6■□□□□ 0.73
MCF2L-226ENST00000486210 BCL7CQ8WUZ0 217 aaPredicted RBP19.6■□□□□ 0.73
MCF2L-226ENST00000486210 DBR1Q9UK59 544 aaKnown RBP19.6■□□□□ 0.73
MCF2L-226ENST00000486210 USTQ9Y2C2 406 aa19.6■□□□□ 0.73
MCF2L-226ENST00000486210 IRAK3Q9Y616 596 aa19.6■□□□□ 0.73
MCF2L-226ENST00000486210 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.59■□□□□ 0.73
MCF2L-226ENST00000486210 PI15O43692 258 aa19.59■□□□□ 0.73
MCF2L-226ENST00000486210 CSDE1O75534 798 aaKnown RBP19.59■□□□□ 0.73
MCF2L-226ENST00000486210 NPR3P17342 541 aa19.59■□□□□ 0.73
MCF2L-226ENST00000486210 ALDH7A1P49419 539 aaKnown RBP19.59■□□□□ 0.73
MCF2L-226ENST00000486210 PRKCEQ02156 737 aa19.59■□□□□ 0.73
MCF2L-226ENST00000486210 GRIN1Q05586 938 aa19.59■□□□□ 0.73
MCF2L-226ENST00000486210 SLC39A14Q15043 492 aa19.59■□□□□ 0.73
MCF2L-226ENST00000486210 ATAT1Q5SQI0 421 aa19.59■□□□□ 0.73
MCF2L-226ENST00000486210 PLCD3Q8N3E9 789 aa19.59■□□□□ 0.73
MCF2L-226ENST00000486210 RDM1Q8NG50 284 aa19.59■□□□□ 0.73
MCF2L-226ENST00000486210 NKD2Q969F2 451 aaPredicted RBP19.59■□□□□ 0.73
MCF2L-226ENST00000486210 TMEM169Q96HH4 297 aa19.59■□□□□ 0.73
MCF2L-226ENST00000486210 MRPL9Q9BYD2 267 aaKnown RBP19.59■□□□□ 0.73
MCF2L-226ENST00000486210 MFSD1Q9H3U5 465 aa19.59■□□□□ 0.73
MCF2L-226ENST00000486210 DZANK1Q9NVP4 752 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms