RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 PRDM5Q9NQX1 630 aaPredicted RBP6.26□□□□□ -1.41
COPS3-208ENST00000486032 TRMT13Q9NUP7 481 aaKnown RBP6.26□□□□□ -1.41
COPS3-208ENST00000486032 ZMYND8Q9ULU4 1186 aaPredicted RBP6.26□□□□□ -1.41
COPS3-208ENST00000486032 RANBP2P49792 3224 aaKnown RBP6.26□□□□□ -1.41
COPS3-208ENST00000486032 PDE4DIPQ5VU43 2346 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 GRIN2DO15399 1336 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 WDR81Q562E7 1941 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 KAT6AQ92794 2004 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 NPHP3-ACAD11A0A0J9YXS1 232 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 A0A1W2PQ27 194 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 A0A1W2PQ64 194 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 A0A1W2PQD8 194 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 TLR3O15455 904 aaKnown RBP6.25□□□□□ -1.41
COPS3-208ENST00000486032 B4GALT4O60513 344 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 ZNF202O95125 648 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 STBD1O95210 358 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 EYA4O95677 639 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 GNAT1P11488 350 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 HOXD8P13378 290 aaPredicted RBP6.25□□□□□ -1.41
COPS3-208ENST00000486032 IDEP14735 1019 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 CASP1P29466 404 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 MCM4P33991 863 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 RARRES1P49788 294 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 SLC26A2P50443 739 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 CLCN3P51790 818 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 POLGP54098 1239 aaPredicted RBP6.25□□□□□ -1.41
COPS3-208ENST00000486032 RTP1P59025 263 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 UBE2HP62256 183 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 DHX9Q08211 1270 aaKnown RBP6.25□□□□□ -1.41
COPS3-208ENST00000486032 TMEM62Q0P6H9 643 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 PTGISQ16647 500 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 ZNF484Q5JVG2 852 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 FAM102BQ5T8I3 360 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 EFCAB12Q6NXP0 572 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 NFRKBQ6P4R8 1299 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 MTHFD1LQ6UB35 978 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 RUFY4Q6ZNE9 571 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 SV2BQ7L1I2 683 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 DYMQ7RTS9 669 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 GPBP1Q86WP2 473 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 IQUBQ8NA54 791 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 CNNM3Q8NE01 707 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 ARMC2Q8NEN0 867 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 LRRC15Q8TF66 581 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 LMBR1Q8WVP7 490 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 EDARADDQ8WWZ3 215 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 LARP4BQ92615 738 aaKnown RBP6.25□□□□□ -1.41
COPS3-208ENST00000486032 RAD54LQ92698 747 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 DPF3Q92784 378 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 TMEM143Q96AN5 459 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 SCLT1Q96NL6 688 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 BLZF1Q9H2G9 400 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 GPRC5CQ9NQ84 441 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 CYP26B1Q9NR63 512 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 ANKEF1Q9NU02 776 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 LMBRD1Q9NUN5 540 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 BLOC1S4Q9NUP1 217 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 NOP53Q9NZM5 478 aaKnown RBP6.25□□□□□ -1.41
COPS3-208ENST00000486032 GTF2IRD1Q9UHL9 959 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 TUBE1Q9UJT0 475 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 AKT3Q9Y243 479 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 GINS2Q9Y248 185 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 MORC2Q9Y6X9 1032 aaPredicted RBP6.25□□□□□ -1.41
COPS3-208ENST00000486032 NRCAMQ92823 1304 aa6.25□□□□□ -1.41
COPS3-208ENST00000486032 TRIP12Q14669 1992 aaPredicted RBP6.24□□□□□ -1.41
COPS3-208ENST00000486032 RRN3P2A6NIE6 340 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 SFI1A8K8P3 1242 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 DCDC2CA8MYV0 355 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 LYPLA2O95372 231 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 C22orf31O95567 290 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 VTNP04004 478 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 CTSHP09668 335 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 NDUFV2P19404 249 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 MUTP22033 750 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 TMOD1P28289 359 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 THPOP40225 353 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 TLE2Q04725 743 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 DRP2Q13474 957 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 EMC2Q15006 297 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 LONRF3Q496Y0 759 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 NAALADL2Q58DX5 795 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 HYIQ5T013 277 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 RINT1Q6NUQ1 792 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 RHPN2Q8IUC4 686 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 SYT2Q8N9I0 419 aaPredicted RBP6.24□□□□□ -1.41
COPS3-208ENST00000486032 TMEM87AQ8NBN3 555 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 RETREG2Q8NC44 543 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 DNAJB3Q8WWF6 145 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 SLC7A3Q8WY07 619 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 ERCC4Q92889 916 aaPredicted RBP6.24□□□□□ -1.41
COPS3-208ENST00000486032 RUSC1Q9BVN2 902 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 NIFKQ9BYG3 293 aaKnown RBP6.24□□□□□ -1.41
COPS3-208ENST00000486032 KRTAP4-2Q9BYR5 136 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 PPP1R12CQ9BZL4 782 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 POLR3FQ9H1D9 316 aaPredicted RBP6.24□□□□□ -1.41
COPS3-208ENST00000486032 ATP6V0A4Q9HBG4 840 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 DACT1Q9NYF0 836 aa6.24□□□□□ -1.41
COPS3-208ENST00000486032 SUCLA2Q9P2R7 463 aaPredicted RBP6.24□□□□□ -1.41
COPS3-208ENST00000486032 DBR1Q9UK59 544 aaKnown RBP6.24□□□□□ -1.41
COPS3-208ENST00000486032 HPSEQ9Y251 543 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms