RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 LAIR1Q6GTX8 287 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 CXorf67Q86X51 503 aaPredicted RBP5.9□□□□□ -1.46
GCFC2-209ENST00000486016 ZNF276Q8N554 614 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 ARL8AQ96BM9 186 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 UIMC1Q96RL1 719 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 PDCD2LQ9BRP1 358 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 MLST8Q9BVC4 326 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 IFT57Q9NWB7 429 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 USP36Q9P275 1121 aaKnown RBP5.9□□□□□ -1.46
GCFC2-209ENST00000486016 NCDNQ9UBB6 729 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 TMPRSS11EQ9UL52 423 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 FZD1Q9UP38 647 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 ZKSCAN5Q9Y2L8 839 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 KPNA6O60684 536 aa5.89□□□□□ -1.47
GCFC2-209ENST00000486016 PCDH8O95206 1070 aa5.89□□□□□ -1.47
GCFC2-209ENST00000486016 CD40P25942 277 aa5.89□□□□□ -1.47
GCFC2-209ENST00000486016 TKFCQ3LXA3 575 aa5.89□□□□□ -1.47
GCFC2-209ENST00000486016 LRRTM3Q86VH5 581 aa5.89□□□□□ -1.47
GCFC2-209ENST00000486016 LYSMD2Q8IV50 215 aa5.89□□□□□ -1.47
GCFC2-209ENST00000486016 SMC1BQ8NDV3 1235 aa5.89□□□□□ -1.47
GCFC2-209ENST00000486016 OR52N2Q8NGI0 321 aa5.89□□□□□ -1.47
GCFC2-209ENST00000486016 VOPP1Q96AW1 172 aa5.89□□□□□ -1.47
GCFC2-209ENST00000486016 LSM14BQ9BX40 385 aaKnown RBP5.89□□□□□ -1.47
GCFC2-209ENST00000486016 CPEB1Q9BZB8 566 aaKnown RBP5.89□□□□□ -1.47
GCFC2-209ENST00000486016 PCDHB6Q9Y5E3 794 aa5.89□□□□□ -1.47
GCFC2-209ENST00000486016 COL4A3Q01955 1670 aa5.88□□□□□ -1.47
GCFC2-209ENST00000486016 TMEM191CA6NGB0 347 aa5.88□□□□□ -1.47
GCFC2-209ENST00000486016 GNAT2P19087 354 aa5.88□□□□□ -1.47
GCFC2-209ENST00000486016 PHC1P78364 1004 aa5.88□□□□□ -1.47
GCFC2-209ENST00000486016 MRPL49Q13405 166 aaKnown RBP5.88□□□□□ -1.47
GCFC2-209ENST00000486016 PCBP1Q15365 356 aaKnown RBP eCLIP5.88□□□□□ -1.47
GCFC2-209ENST00000486016 TCEA2Q15560 299 aa5.88□□□□□ -1.47
GCFC2-209ENST00000486016 C21orf62-AS1Q17RA5 79 aa5.88□□□□□ -1.47
GCFC2-209ENST00000486016 MBNL2Q5VZF2 373 aaKnown RBP5.88□□□□□ -1.47
GCFC2-209ENST00000486016 TAS1R1Q7RTX1 841 aa5.88□□□□□ -1.47
GCFC2-209ENST00000486016 SLC41A1Q8IVJ1 513 aa5.88□□□□□ -1.47
GCFC2-209ENST00000486016 CDYL2Q8N8U2 506 aa5.88□□□□□ -1.47
GCFC2-209ENST00000486016 NINJ1Q92982 152 aa5.88□□□□□ -1.47
GCFC2-209ENST00000486016 THG1LQ9NWX6 298 aaKnown RBP5.88□□□□□ -1.47
GCFC2-209ENST00000486016 A0A1W2PR48 441 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 LCHNA4D1U4 455 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 GRID2IPA4D2P6 1211 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 AHRRA9YTQ3 701 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 GAS7O60861 476 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 HK1P19367 917 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 ADRA1BP35368 520 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 CASRP41180 1078 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 ATXN1P54253 815 aaKnown RBP5.87□□□□□ -1.47
GCFC2-209ENST00000486016 SEPT7Q16181 437 aaKnown RBP5.87□□□□□ -1.47
GCFC2-209ENST00000486016 ESPNLQ6ZVH7 1005 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 GPRIN1Q7Z2K8 1008 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 VRK3Q8IV63 474 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 MSL3Q8N5Y2 521 aaKnown RBP5.87□□□□□ -1.47
GCFC2-209ENST00000486016 ZNF610Q8N9Z0 462 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 MS4A5Q9H3V2 200 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 MSRAQ9UJ68 235 aa5.87□□□□□ -1.47
GCFC2-209ENST00000486016 PRSS38A1L453 326 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 NRP1O14786 923 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 TRIM24O15164 1050 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 GCP02774 474 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 ITGB1P05556 798 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 GPR15P49685 360 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 NEK4P51957 841 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 CSRP2Q16527 193 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 LRCH2Q5VUJ6 765 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 LRRC55Q6ZSA7 311 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 C16orf86Q6ZW13 317 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 DOK3Q7L591 496 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 GPR150Q8NGU9 434 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 ZNF768Q9H5H4 540 aaKnown RBP5.86□□□□□ -1.47
GCFC2-209ENST00000486016 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.86□□□□□ -1.47
GCFC2-209ENST00000486016 SORCS3Q9UPU3 1222 aa5.86□□□□□ -1.47
GCFC2-209ENST00000486016 DNAJC6O75061 913 aa5.85□□□□□ -1.47
GCFC2-209ENST00000486016 TERF2Q15554 542 aa5.85□□□□□ -1.47
GCFC2-209ENST00000486016 VPS72Q15906 364 aa5.85□□□□□ -1.47
GCFC2-209ENST00000486016 CCDC178Q5BJE1 867 aa5.85□□□□□ -1.47
GCFC2-209ENST00000486016 HOMER1Q86YM7 354 aa5.85□□□□□ -1.47
GCFC2-209ENST00000486016 CPT1CQ8TCG5 803 aa5.85□□□□□ -1.47
GCFC2-209ENST00000486016 GAB3Q8WWW8 586 aa5.85□□□□□ -1.47
GCFC2-209ENST00000486016 CPPED1Q9BRF8 314 aaPredicted RBP5.85□□□□□ -1.47
GCFC2-209ENST00000486016 KCNH6Q9H252 994 aa5.85□□□□□ -1.47
GCFC2-209ENST00000486016 SPTLC3Q9NUV7 552 aa5.85□□□□□ -1.47
GCFC2-209ENST00000486016 NUMBLQ9Y6R0 609 aa5.85□□□□□ -1.47
GCFC2-209ENST00000486016 IL12RB1P42701 662 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 KPNA1P52294 538 aaPredicted RBP5.84□□□□□ -1.47
GCFC2-209ENST00000486016 WNT3AP56704 352 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 FAM189BP81408 668 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 FAM83AQ86UY5 434 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 PASD1Q8IV76 773 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 LILRA3Q8N6C8 439 aaPredicted RBP5.84□□□□□ -1.47
GCFC2-209ENST00000486016 OR5M3Q8NGP4 307 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 UBXN4Q92575 508 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 IL17RAQ96F46 866 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 NDC1Q9BTX1 674 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 PRDM12Q9H4Q4 367 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 DKK2Q9UBU2 259 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 USP18Q9UMW8 372 aa5.84□□□□□ -1.47
GCFC2-209ENST00000486016 ADCYAP1R1P41586 468 aa5.83□□□□□ -1.48
GCFC2-209ENST00000486016 GZMKP49863 264 aa5.83□□□□□ -1.48
GCFC2-209ENST00000486016 MANFP55145 182 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms