RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 GLT1D1Q96MS3 346 aa12.42□□□□□ -0.42
SND1-212ENST00000485871 ACCSQ96QU6 501 aa12.42□□□□□ -0.42
SND1-212ENST00000485871 GBP3Q9H0R5 595 aa12.42□□□□□ -0.42
SND1-212ENST00000485871 PRO3102Q9H379 93 aa12.42□□□□□ -0.42
SND1-212ENST00000485871 THAP9Q9H5L6 903 aa12.42□□□□□ -0.42
SND1-212ENST00000485871 TMEM206Q9H813 350 aa12.42□□□□□ -0.42
SND1-212ENST00000485871 AGPAT3Q9NRZ7 376 aa12.42□□□□□ -0.42
SND1-212ENST00000485871 DMAC2Q9NW81 257 aa12.42□□□□□ -0.42
SND1-212ENST00000485871 CUL9Q8IWT3 2517 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 A0A087WZ62 844 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 TTLL13PA6NNM8 815 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 TISP43B9A030 160 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 SGPL1O95470 568 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
SND1-212ENST00000485871 IQCF3P0C7M6 154 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 SRGAP2CP0DJJ0 459 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 ABCD1P33897 745 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 CHMP4BP1P59074 171 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 SNRPFP62306 86 aaKnown RBP12.41□□□□□ -0.42
SND1-212ENST00000485871 FKBP3Q00688 224 aaKnown RBP12.41□□□□□ -0.42
SND1-212ENST00000485871 MBTD1Q05BQ5 628 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 TFDP1Q14186 410 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 AMHR2Q16671 573 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 TRIM71Q2Q1W2 868 aaKnown RBP12.41□□□□□ -0.42
SND1-212ENST00000485871 TAF2Q6P1X5 1199 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 SLC9A9Q8IVB4 645 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 CSGALNACT2Q8N6G5 542 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 NOC3LQ8WTT2 800 aaKnown RBP12.41□□□□□ -0.42
SND1-212ENST00000485871 DNAJB3Q8WWF6 145 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 ZNF668Q96K58 619 aaPredicted RBP12.41□□□□□ -0.42
SND1-212ENST00000485871 NLRP4Q96MN2 994 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 MAP7D2Q96T17 732 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 FDXACB1Q9BRP7 624 aaPredicted RBP12.41□□□□□ -0.42
SND1-212ENST00000485871 SRRTQ9BXP5 876 aaKnown RBP12.41□□□□□ -0.42
SND1-212ENST00000485871 C2orf40Q9H1Z8 148 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 FZD8Q9H461 694 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 MINDY3Q9H8M7 445 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 RTN4Q9NQC3 1192 aaKnown RBP12.41□□□□□ -0.42
SND1-212ENST00000485871 AKT3Q9Y243 479 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 STYXL1Q9Y6J8 313 aa12.41□□□□□ -0.42
SND1-212ENST00000485871 TANC1Q9C0D5 1861 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 KBTBD13C9JR72 458 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 ANKRD63C9JTQ0 380 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 K7ERI5 159 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 SOX1O00570 391 aaPredicted RBP12.4□□□□□ -0.42
SND1-212ENST00000485871 ABLIM1O14639 778 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 CALUO43852 315 aaPredicted RBP12.4□□□□□ -0.42
SND1-212ENST00000485871 NR3C1P04150 777 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 ADSSP30520 456 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 GJA8P48165 433 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 CDK7P50613 346 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 EFNA5P52803 228 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 MARSP56192 900 aaKnown RBP12.4□□□□□ -0.42
SND1-212ENST00000485871 NLRP11P59045 1033 aaKnown RBP12.4□□□□□ -0.42
SND1-212ENST00000485871 MYBPC2Q14324 1141 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 FAM187BQ17R55 369 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 U2AF1L4Q8WU68 220 aaKnown RBP12.4□□□□□ -0.42
SND1-212ENST00000485871 DHX38Q92620 1227 aaKnown RBP12.4□□□□□ -0.42
SND1-212ENST00000485871 CEP63Q96MT8 703 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 TSG101Q99816 390 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 HAPLN2Q9GZV7 340 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 FAM49AQ9H0Q0 323 aaPredicted RBP12.4□□□□□ -0.42
SND1-212ENST00000485871 CDHR5Q9HBB8 845 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 STARD7Q9NQZ5 370 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 CGNQ9P2M7 1197 aaKnown RBP12.4□□□□□ -0.42
SND1-212ENST00000485871 EXOC7Q9UPT5 735 aa12.4□□□□□ -0.42
SND1-212ENST00000485871 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.4□□□□□ -0.423e-11■□□□□ 9
SND1-212ENST00000485871 RANBP2P49792 3224 aaKnown RBP12.4□□□□□ -0.42
SND1-212ENST00000485871 A0A0U1RQG5 324 aaPredicted RBP12.39□□□□□ -0.43
SND1-212ENST00000485871 LRRC10BA6NIK2 292 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 ARVCFO00192 962 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 CLIC2O15247 247 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 EVI5O60447 810 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 PRKCBP05771 671 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 NR2F2P24468 414 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 PHKA2P46019 1235 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 MCCD1P59942 119 aaPredicted RBP12.39□□□□□ -0.43
SND1-212ENST00000485871 CDC42EP1Q00587 391 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 FANCCQ00597 558 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 MGAT3Q09327 533 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 HSP90AA4PQ58FG1 418 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 FAM47CQ5HY64 1035 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 ZPBP2Q6X784 338 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 SRGAP1Q7Z6B7 1085 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 FILIP1Q7Z7B0 1213 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 ZBTB8OSQ8IWT0 167 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 DRC7Q8IY82 874 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 NME8Q8N427 588 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 GOLGA5Q8TBA6 731 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 EEF2KMTQ96G04 330 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 BORCS6Q96GS4 357 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 PPP1R16BQ96T49 567 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 CBWD1Q9BRT8 395 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 TARS2Q9BW92 718 aaKnown RBP12.39□□□□□ -0.43
SND1-212ENST00000485871 TRMT13Q9NUP7 481 aaKnown RBP12.39□□□□□ -0.43
SND1-212ENST00000485871 INTS13Q9NVM9 706 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 LIMA1Q9UHB6 759 aaKnown RBP12.39□□□□□ -0.43
SND1-212ENST00000485871 USP20Q9Y2K6 914 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 RALGAPA2Q2PPJ7 1873 aa12.39□□□□□ -0.43
SND1-212ENST00000485871 COL6A3P12111 3177 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms