RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 AAK1Q2M2I8 961 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 NOMO2Q5JPE7 1267 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 FAM173BQ6P4H8 233 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 AGMOQ6ZNB7 445 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 EP400NLQ6ZTU2 488 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 MRPL10Q7Z7H8 261 aaKnown RBP20.37■□□□□ 0.85
COL1A1-206ENST00000485870 CDR2LQ86X02 465 aaPredicted RBP20.37■□□□□ 0.85
COL1A1-206ENST00000485870 DEPTORQ8TB45 409 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 KIFAP3Q92845 792 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 CCDC51Q96ER9 411 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 IFT74Q96LB3 600 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 RUSC1Q9BVN2 902 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 CSRNP2Q9H175 543 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 C2orf40Q9H1Z8 148 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 MTMR6Q9Y217 621 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 CLIC4Q9Y696 253 aa20.37■□□□□ 0.85
COL1A1-206ENST00000485870 TCF20Q9UGU0 1960 aaKnown RBP20.36■□□□□ 0.85
COL1A1-206ENST00000485870 SSBP05455 408 aaKnown RBP eCLIP20.36■□□□□ 0.85
COL1A1-206ENST00000485870 NCLP19338 710 aaKnown RBP20.36■□□□□ 0.85
COL1A1-206ENST00000485870 GRIN1Q05586 938 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 PPP2R5AQ15172 486 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 HYIQ5T013 277 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 CABP7Q86V35 215 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 SMG8Q8ND04 991 aaKnown RBP20.36■□□□□ 0.85
COL1A1-206ENST00000485870 AK8Q96MA6 479 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 KIFC3Q9BVG8 833 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 APOL6Q9BWW8 343 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 TRIM6Q9C030 488 aaPredicted RBP20.36■□□□□ 0.85
COL1A1-206ENST00000485870 NT5C3AQ9H0P0 336 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 RSAD1Q9HA92 442 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 TBC1D13Q9NVG8 400 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 PRMT7Q9NVM4 692 aaPredicted RBP20.36■□□□□ 0.85
COL1A1-206ENST00000485870 HES2Q9Y543 173 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 IPPQ9Y573 584 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 PCDHGC5Q9Y5F6 944 aa20.36■□□□□ 0.85
COL1A1-206ENST00000485870 STX6O43752 255 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 ZC3H11AO75152 810 aaKnown RBP eCLIP20.35■□□□□ 0.85
COL1A1-206ENST00000485870 ITGA4P13612 1032 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 KCNA5P22460 613 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 PPM1AP35813 382 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 UBE3AQ05086 875 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 RNASELQ05823 741 aaKnown RBP20.35■□□□□ 0.85
COL1A1-206ENST00000485870 HYAL1Q12794 435 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 TMEM132AQ24JP5 1023 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 RINT1Q6NUQ1 792 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 PPP4R3CPQ6ZMV5 832 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 CNNM3Q8NE01 707 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 URGCPQ8TCY9 931 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 RSPH1Q8WYR4 309 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 SYMPKQ92797 1274 aaKnown RBP20.35■□□□□ 0.85
COL1A1-206ENST00000485870 GBP3Q9H0R5 595 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 IGFLR1Q9H665 355 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 SPG21Q9NZD8 308 aa20.35■□□□□ 0.85
COL1A1-206ENST00000485870 CNTNAP2Q9UHC6 1331 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.34■□□□□ 0.85
COL1A1-206ENST00000485870 NT5C1B-RDH14C9J2C7 533 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 HIP1RO75146 1068 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 NPTXRO95502 500 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 PRKCBP05771 671 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 HSP90AA1P07900 732 aaKnown RBP20.34■□□□□ 0.85
COL1A1-206ENST00000485870 GTF2F1P35269 517 aaKnown RBP eCLIP20.34■□□□□ 0.85
COL1A1-206ENST00000485870 UBA7P41226 1012 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 AFF1P51825 1210 aaKnown RBP20.34■□□□□ 0.85
COL1A1-206ENST00000485870 BCAR1P56945 870 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 CEBPZQ03701 1054 aaKnown RBP20.34■□□□□ 0.85
COL1A1-206ENST00000485870 MAPK6Q16659 721 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 TMEM119Q4V9L6 283 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 SLC27A1Q6PCB7 646 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 C1orf186Q6ZWK4 172 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 ADGRD2Q7Z7M1 963 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 MICAL1Q8TDZ2 1067 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 MRPS27Q92552 414 aaKnown RBP20.34■□□□□ 0.85
COL1A1-206ENST00000485870 PRIMPOLQ96LW4 560 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 RNF39Q9H2S5 420 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 FZD8Q9H461 694 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 NXF3Q9H4D5 531 aaKnown RBP20.34■□□□□ 0.85
COL1A1-206ENST00000485870 NRDE2Q9H7Z3 1164 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 TLR9Q9NR96 1032 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 CLDND1Q9NY35 253 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 USP20Q9Y2K6 914 aa20.34■□□□□ 0.85
COL1A1-206ENST00000485870 A0A1B0GUA9 196 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 TTLL13PA6NNM8 815 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 MARCKSP29966 332 aaPredicted RBP20.33■□□□□ 0.85
COL1A1-206ENST00000485870 LONP1P36776 959 aaKnown RBP20.33■□□□□ 0.85
COL1A1-206ENST00000485870 ALDH7A1P49419 539 aaKnown RBP20.33■□□□□ 0.85
COL1A1-206ENST00000485870 PEX3P56589 373 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 ERVFC1P60507 584 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 PLCB3Q01970 1234 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 RAD51AP2Q09MP3 1159 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 PRPF4BQ13523 1007 aaKnown RBP20.33■□□□□ 0.85
COL1A1-206ENST00000485870 PTPAQ15257 358 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 FAM187BQ17R55 369 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 DAW1Q8N136 415 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 SLC39A11Q8N1S5 342 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 ADAMTS19Q8TE59 1207 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 PPP2R3CQ969Q6 453 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 PABPC5Q96DU9 382 aaKnown RBP20.33■□□□□ 0.85
COL1A1-206ENST00000485870 CALML4Q96GE6 196 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 CCDC113Q9H0I3 377 aa20.33■□□□□ 0.85
COL1A1-206ENST00000485870 PUF60Q9UHX1 559 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms