RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 DDX12PQ92771 950 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 PGBD4Q96DM1 585 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 TIGD1Q96MW7 591 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 ASB2Q96Q27 587 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 PPP1R16BQ96T49 567 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 C7orf25Q9BPX7 421 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 ADPGKQ9BRR6 497 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 TRIM6Q9C030 488 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-208ENST00000485618 SLC28A3Q9HAS3 691 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 GDPD2Q9HCC8 539 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 ERVK-5Q9HDB9 667 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 UBN1Q9NPG3 1134 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 RMND1Q9NWS8 449 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 EXOC7Q9UPT5 735 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 HPSEQ9Y251 543 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 YBX2Q9Y2T7 364 aaKnown RBP9.11□□□□□ -0.95
SF3A1-208ENST00000485618 NOC2LQ9Y3T9 749 aaKnown RBP9.11□□□□□ -0.95
SF3A1-208ENST00000485618 PCDHB7Q9Y5E2 793 aa9.11□□□□□ -0.95
SF3A1-208ENST00000485618 ACKR2O00590 384 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 ENPP3O14638 875 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 TRAK2O60296 914 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 PRPF40AO75400 957 aaKnown RBP9.1□□□□□ -0.95
SF3A1-208ENST00000485618 ZNF202O95125 648 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 EOMESO95936 686 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 ATP2A2P16615 1042 aaKnown RBP9.1□□□□□ -0.95
SF3A1-208ENST00000485618 NDUFA8P51970 172 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 MRPS5P82675 430 aaKnown RBP9.1□□□□□ -0.95
SF3A1-208ENST00000485618 RAD51AP2Q09MP3 1159 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 PSMD2Q13200 908 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 GIT2Q14161 759 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 MBTPS1Q14703 1052 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 KYAT1Q16773 422 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 FAM187BQ17R55 369 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 LONRF3Q496Y0 759 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 TPRNQ4KMQ1 711 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 ARSHQ5FYA8 562 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 PPP2R2DQ66LE6 453 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 CDCA2Q69YH5 1023 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-208ENST00000485618 DYMQ7RTS9 669 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 ABI1Q8IZP0 508 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 HVCN1Q96D96 273 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 UHRF1Q96T88 793 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-208ENST00000485618 ADAM2Q99965 735 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 REEP2Q9BRK0 252 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 TCHPQ9BT92 498 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 MRPL4Q9BYD3 311 aaKnown RBP9.1□□□□□ -0.95
SF3A1-208ENST00000485618 TSPYL2Q9H2G4 693 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-208ENST00000485618 AGO3Q9H9G7 860 aaKnown RBP9.1□□□□□ -0.95
SF3A1-208ENST00000485618 MRPL44Q9H9J2 332 aaKnown RBP9.1□□□□□ -0.95
SF3A1-208ENST00000485618 CDHR5Q9HBB8 845 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 IFT122Q9HBG6 1241 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 GPRC5CQ9NQ84 441 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 RGS18Q9NS28 235 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 AGPAT5Q9NUQ2 364 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 PANK4Q9NVE7 773 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 PIN4Q9Y237 131 aaKnown RBP9.1□□□□□ -0.95
SF3A1-208ENST00000485618 GBF1Q92538 1859 aa9.1□□□□□ -0.95
SF3A1-208ENST00000485618 MYMKA6NI61 221 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 SFI1A8K8P3 1242 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 N4BP3O15049 544 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 SLC16A4O15374 487 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 GTPBP6O43824 516 aaPredicted RBP9.09□□□□□ -0.95
SF3A1-208ENST00000485618 PRKCBP05771 671 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 LIG1P18858 919 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 HOXD11P31277 338 aaPredicted RBP9.09□□□□□ -0.95
SF3A1-208ENST00000485618 AFMP43652 599 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 SARSP49591 514 aaKnown RBP9.09□□□□□ -0.95
SF3A1-208ENST00000485618 ZNF131P52739 623 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 RABGGTBP53611 331 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 MBTD1Q05BQ5 628 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 E2F4Q16254 413 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 NAALADL2Q58DX5 795 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 SLFN12LQ6IEE8 588 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 PPP4R3CPQ6ZMV5 832 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 UNC13DQ70J99 1090 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 FAM228AQ86W67 206 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 NPAS4Q8IUM7 802 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 ELOA2Q8IYF1 753 aaPredicted RBP9.09□□□□□ -0.95
SF3A1-208ENST00000485618 MYOCDQ8IZQ8 938 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 BICD1Q96G01 975 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 PAGE5Q96GU1 130 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 TRAIPQ9BWF2 469 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 TRIM9Q9C026 710 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 FZD8Q9H461 694 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 ST6GALNAC4Q9H4F1 302 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 ELAC1Q9H777 363 aaKnown RBP9.09□□□□□ -0.95
SF3A1-208ENST00000485618 TMEM206Q9H813 350 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 OLFML3Q9NRN5 406 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 SERTAD1Q9UHV2 236 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 INSL6Q9Y581 213 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 TCHHQ07283 1943 aa9.09□□□□□ -0.95
SF3A1-208ENST00000485618 MUC3AQ02505 3323 aa9.08□□□□□ -0.96
SF3A1-208ENST00000485618 A0A087X0B3 334 aa9.08□□□□□ -0.96
SF3A1-208ENST00000485618 NPHP3-ACAD11A0A0J9YXS1 232 aa9.08□□□□□ -0.96
SF3A1-208ENST00000485618 A0A0U1RQF3 1178 aa9.08□□□□□ -0.96
SF3A1-208ENST00000485618 K7ENM7 598 aa9.08□□□□□ -0.96
SF3A1-208ENST00000485618 TLL1O43897 1013 aa9.08□□□□□ -0.96
SF3A1-208ENST00000485618 ZNF623O75123 536 aa9.08□□□□□ -0.96
SF3A1-208ENST00000485618 MYOGP15173 224 aa9.08□□□□□ -0.96
SF3A1-208ENST00000485618 MATR3P43243 847 aaKnown RBP eCLIP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms