RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	B3GALT2	O43825	422 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	PHF2	O75151	1096 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	LY86	O95711	162 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	LTA4H	P09960	611 aa	Known RBP	5.17	□□□□□ -1.58
FN1-222	ENST00000485567	CTSS	P25774	331 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	POLD1	P28340	1107 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	AGFG1	P52594	562 aa	Known RBP	5.17	□□□□□ -1.58
FN1-222	ENST00000485567	ZNF280A	P59817	542 aa	Predicted RBP	5.17	□□□□□ -1.58
FN1-222	ENST00000485567	FAM193A	P78312	1265 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	DSC2	Q02487	901 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	CD69	Q07108	199 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	LONRF3	Q496Y0	759 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	PRR31	Q5SQ13	230 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	PHF19	Q5T6S3	580 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	THEMIS2	Q5TEJ8	643 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	PRR23B	Q6ZRT6	265 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	OTOP2	Q7RTS6	562 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	TTC7B	Q86TV6	843 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	STK32C	Q86UX6	486 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	CAMKK1	Q8N5S9	505 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
FN1-222	ENST00000485567	PPP1R35	Q8TAP8	253 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	DPF2	Q92785	391 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	ZSWIM3	Q96MP5	696 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	WDR92	Q96MX6	357 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	DIRC2	Q96SL1	478 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	C7orf25	Q9BPX7	421 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	GCM1	Q9NP62	436 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	KMT5A	Q9NQR1	393 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	CROT	Q9UKG9	612 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	L1RE1	Q9UN81	338 aa		5.17	□□□□□ -1.58
FN1-222	ENST00000485567	TMEM127	O75204	238 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	ALDH2	P05091	517 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	IFIT2	P09913	472 aa	Known RBP	5.16	□□□□□ -1.58
FN1-222	ENST00000485567	IL13	P35225	146 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	ADCY8	P40145	1251 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	HTR3A	P46098	478 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	TOP3A	Q13472	1001 aa	Predicted RBP	5.16	□□□□□ -1.58
FN1-222	ENST00000485567	MORC3	Q14149	939 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	NOMO1	Q15155	1222 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	TRIM68	Q6AZZ1	485 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	IL31	Q6EBC2	164 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	MIGA2	Q7L4E1	593 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	TAS1R1	Q7RTX1	841 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	IFNL2	Q8IZJ0	200 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	NSUN6	Q8TEA1	469 aa	Known RBP	5.16	□□□□□ -1.58
FN1-222	ENST00000485567	SNX33	Q8WV41	574 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	HOXB13	Q92826	284 aa	Predicted RBP	5.16	□□□□□ -1.58
FN1-222	ENST00000485567	GFM2	Q969S9	779 aa	Known RBP	5.16	□□□□□ -1.58
FN1-222	ENST00000485567	STRBP	Q96SI9	672 aa	Known RBP	5.16	□□□□□ -1.58
FN1-222	ENST00000485567	MPHOSPH6	Q99547	160 aa	Known RBP	5.16	□□□□□ -1.58
FN1-222	ENST00000485567	CGRRF1	Q99675	332 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	PTPN18	Q99952	460 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	DMRT3	Q9NQL9	472 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
FN1-222	ENST00000485567	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	5.16	□□□□□ -1.58
FN1-222	ENST00000485567	DNAI1	Q9UI46	699 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	MAGEL2	Q9UJ55	1249 aa		5.16	□□□□□ -1.58
FN1-222	ENST00000485567	DAPK3	O43293	454 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	KLHL18	O94889	574 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	ENDOD1	O94919	500 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	GAA	P10253	952 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	HTR1B	P28222	390 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	ETV4	P43268	484 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	NEK3	P51956	506 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	CACNB3	P54284	484 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	EPHB3	P54753	998 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	MLLT6	P55198	1093 aa	Predicted RBP	5.15	□□□□□ -1.59
FN1-222	ENST00000485567	GJA9	P57773	515 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	DLG4	P78352	724 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	CAP1	Q01518	475 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	IL10RA	Q13651	578 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	LLGL1	Q15334	1064 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	UBE3C	Q15386	1083 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	ANO6	Q4KMQ2	910 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	TRMT10B	Q6PF06	316 aa	Known RBP	5.15	□□□□□ -1.59
FN1-222	ENST00000485567	DARS2	Q6PI48	645 aa	Known RBP	5.15	□□□□□ -1.59
FN1-222	ENST00000485567	FAM129C	Q86XR2	697 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	EXOC8	Q8IYI6	725 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	FBXO15	Q8NCQ5	510 aa	Predicted RBP	5.15	□□□□□ -1.59
FN1-222	ENST00000485567	FAM156A	Q8NDB6	213 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	OR2I1P	Q8NGU4	316 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	ZBTB8A	Q96BR9	441 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	CDK5RAP3	Q96JB5	506 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	LRFN3	Q9BTN0	628 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	SGPP1	Q9BX95	441 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	5.15	□□□□□ -1.59
FN1-222	ENST00000485567	POLH	Q9Y253	713 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	STXBP5L	Q9Y2K9	1186 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	PCDHB1	Q9Y5F3	818 aa		5.15	□□□□□ -1.59
FN1-222	ENST00000485567	CAPN8	A6NHC0	703 aa		5.14	□□□□□ -1.59
FN1-222	ENST00000485567	PMM2	O15305	246 aa		5.14	□□□□□ -1.59
FN1-222	ENST00000485567	AKR1B10	O60218	316 aa		5.14	□□□□□ -1.59
FN1-222	ENST00000485567	ARIH2	O95376	493 aa		5.14	□□□□□ -1.59
FN1-222	ENST00000485567	LDHA	P00338	332 aa	Known RBP	5.14	□□□□□ -1.59
FN1-222	ENST00000485567	MYB	P10242	640 aa		5.14	□□□□□ -1.59
FN1-222	ENST00000485567	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.14	□□□□□ -1.59
FN1-222	ENST00000485567	ZNF28	P17035	718 aa		5.14	□□□□□ -1.59
FN1-222	ENST00000485567	RPL13	P26373	211 aa	Known RBP	5.14	□□□□□ -1.59
FN1-222	ENST00000485567	WNT3A	P56704	352 aa		5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms