RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 PCDHB1Q9Y5F3 818 aa6.6□□□□□ -1.35
SRRM1-213ENST00000485441 ETV2O00321 342 aaPredicted RBP6.59□□□□□ -1.35
SRRM1-213ENST00000485441 MYBP10242 640 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 HNRNPLP14866 589 aaKnown RBP eCLIP6.59□□□□□ -1.35
SRRM1-213ENST00000485441 RPL13P26373 211 aaKnown RBP6.59□□□□□ -1.35
SRRM1-213ENST00000485441 MEF2AQ02078 507 aaPredicted RBP6.59□□□□□ -1.35
SRRM1-213ENST00000485441 UBE3CQ15386 1083 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 MAN2A1Q16706 1144 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 VWA3BQ502W6 1294 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 C19orf54Q5BKX5 351 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 SYCP2LQ5T4T6 812 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 KLHDC10Q6PID8 442 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 Q6ZVL8 140 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 LARP4Q71RC2 724 aaKnown RBP eCLIP6.59□□□□□ -1.35
SRRM1-213ENST00000485441 SAPCD2Q86UD0 394 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 KIAA0319LQ8IZA0 1049 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 UNC5BQ8IZJ1 945 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 MARCH10Q8NA82 808 aaPredicted RBP6.59□□□□□ -1.35
SRRM1-213ENST00000485441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.59□□□□□ -1.35
SRRM1-213ENST00000485441 SIGLEC10Q96LC7 697 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 TMEM60Q9H2L4 133 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 SIK3Q9Y2K2 1263 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 VWA7Q9Y334 891 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 PMF1-BGLAPU3KQ54 211 aa6.59□□□□□ -1.35
SRRM1-213ENST00000485441 RPTORQ8N122 1335 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 C2orf78A6NCI8 922 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 APAF1O14727 1248 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 UBXN7O94888 489 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 FSBPO95073 299 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 ZBED1O96006 694 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 LTA4HP09960 611 aaKnown RBP6.58□□□□□ -1.36
SRRM1-213ENST00000485441 MED14OSP0DP75 135 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 PHKG2P15735 406 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 RHCEP18577 417 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 GLDCP23378 1020 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 ETV4P43268 484 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 SLC6A9P48067 706 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 STAT5BP51692 787 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 RHDQ02161 417 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 ZNF827Q17R98 1081 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 TRMT10BQ6PF06 316 aaKnown RBP6.58□□□□□ -1.36
SRRM1-213ENST00000485441 LMBR1LQ6UX01 489 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 OTOP2Q7RTS6 562 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 SRGAP1Q7Z6B7 1085 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 CLEC14AQ86T13 490 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 SNX33Q8WV41 574 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 HDAC10Q969S8 669 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 AJUBAQ96IF1 538 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 YTHDC1Q96MU7 727 aaKnown RBP6.58□□□□□ -1.36
SRRM1-213ENST00000485441 ADI1Q9BV57 179 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 CHMP4AQ9BY43 222 aa6.58□□□□□ -1.36
SRRM1-213ENST00000485441 ANO9A1A5B4 782 aa6.57□□□□□ -1.36
SRRM1-213ENST00000485441 TPP1O14773 563 aa6.57□□□□□ -1.36
SRRM1-213ENST00000485441 B3GALT2O43825 422 aa6.57□□□□□ -1.36
SRRM1-213ENST00000485441 PLIN1O60240 522 aa6.57□□□□□ -1.36
SRRM1-213ENST00000485441 AGFG1P52594 562 aaKnown RBP6.57□□□□□ -1.36
SRRM1-213ENST00000485441 DENND1CQ8IV53 801 aa6.57□□□□□ -1.36
SRRM1-213ENST00000485441 LILRA3Q8N6C8 439 aaPredicted RBP6.57□□□□□ -1.36
SRRM1-213ENST00000485441 ZNF526Q8TF50 670 aaPredicted RBP6.57□□□□□ -1.36
SRRM1-213ENST00000485441 TTC17Q96AE7 1141 aa6.57□□□□□ -1.36
SRRM1-213ENST00000485441 RPS6KC1Q96S38 1066 aa6.57□□□□□ -1.36
SRRM1-213ENST00000485441 CGRRF1Q99675 332 aa6.57□□□□□ -1.36
SRRM1-213ENST00000485441 L1RE1Q9UN81 338 aa6.57□□□□□ -1.36
SRRM1-213ENST00000485441 PCDHA13Q9Y5I0 950 aa6.57□□□□□ -1.36
SRRM1-213ENST00000485441 CFAP20Q9Y6A4 193 aaKnown RBP6.57□□□□□ -1.36
SRRM1-213ENST00000485441 DDX3XO00571 662 aaKnown RBP eCLIP6.56□□□□□ -1.36
SRRM1-213ENST00000485441 KCNQ1P51787 676 aa6.56□□□□□ -1.36
SRRM1-213ENST00000485441 SSPNQ14714 243 aa6.56□□□□□ -1.36
SRRM1-213ENST00000485441 NOMO1Q15155 1222 aa6.56□□□□□ -1.36
SRRM1-213ENST00000485441 SAFBQ15424 915 aaKnown RBP eCLIP6.56□□□□□ -1.36
SRRM1-213ENST00000485441 COBLL1Q53SF7 1204 aa6.56□□□□□ -1.36
SRRM1-213ENST00000485441 Q6ZUG5 572 aa6.56□□□□□ -1.36
SRRM1-213ENST00000485441 MSL3Q8N5Y2 521 aaKnown RBP6.56□□□□□ -1.36
SRRM1-213ENST00000485441 SAMD3Q8N6K7 520 aa6.56□□□□□ -1.36
SRRM1-213ENST00000485441 NSUN6Q8TEA1 469 aaKnown RBP6.56□□□□□ -1.36
SRRM1-213ENST00000485441 KAT5Q92993 513 aa6.56□□□□□ -1.36
SRRM1-213ENST00000485441 SPATA25Q9BR10 227 aa6.56□□□□□ -1.36
SRRM1-213ENST00000485441 CTDP1Q9Y5B0 961 aaPredicted RBP6.56□□□□□ -1.36
SRRM1-213ENST00000485441 IRAK3Q9Y616 596 aa6.56□□□□□ -1.36
SRRM1-213ENST00000485441 SH3D21A4FU49 640 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 FAM171A2A8MVW0 826 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 SGTAO43765 313 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 AKR1B10O60218 316 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 DTNBO60941 627 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 MAP2K6P52564 334 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 BIRC2Q13490 618 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 HDAC1Q13547 482 aaPredicted RBP6.55□□□□□ -1.36
SRRM1-213ENST00000485441 PCOLCEQ15113 449 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 LLGL1Q15334 1064 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 MST1LQ2TV78 715 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 PPP4R4Q6NUP7 873 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 NPNTQ6UXI9 565 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 FAM156AQ8NDB6 213 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 GFM2Q969S9 779 aaKnown RBP6.55□□□□□ -1.36
SRRM1-213ENST00000485441 MRGPRX4Q96LA9 322 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 C7orf25Q9BPX7 421 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 RIPOR2Q9Y4F9 1068 aa6.55□□□□□ -1.36
SRRM1-213ENST00000485441 TPD52L2O43399 206 aaKnown RBP6.54□□□□□ -1.36
SRRM1-213ENST00000485441 PHF2O75151 1096 aa6.54□□□□□ -1.36
SRRM1-213ENST00000485441 SLC5A1P13866 664 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms