RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 PGBD4Q96DM1 585 aa4.69□□□□□ -1.66
VPS50-216ENST00000484954 HIST1H2AHQ96KK5 128 aa4.69□□□□□ -1.66
VPS50-216ENST00000484954 UIMC1Q96RL1 719 aa4.69□□□□□ -1.66
VPS50-216ENST00000484954 MPHOSPH9Q99550 1183 aa4.69□□□□□ -1.66
VPS50-216ENST00000484954 HIST1H2AJQ99878 128 aa4.69□□□□□ -1.66
VPS50-216ENST00000484954 USP36Q9P275 1121 aaKnown RBP4.69□□□□□ -1.66
VPS50-216ENST00000484954 SYNPO2Q9UMS6 1093 aa4.69□□□□□ -1.66
VPS50-216ENST00000484954 PPFIA2O75334 1257 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 ALDH1A2O94788 518 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 LMO1P25800 156 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 PPARAQ07869 468 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 CRHR2Q13324 411 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 PITRM1Q5JRX3 1037 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 CCDC62Q6P9F0 684 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 TMPRSS6Q8IU80 811 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 CMTM4Q8IZR5 234 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 MB21D1Q8N884 522 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 CDYL2Q8N8U2 506 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 NEU4Q8WWR8 484 aaPredicted RBP4.68□□□□□ -1.66
VPS50-216ENST00000484954 GAB3Q8WWW8 586 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 ZNF512Q96ME7 567 aaPredicted RBP4.68□□□□□ -1.66
VPS50-216ENST00000484954 ENKD1Q9H0I2 346 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 EVLQ9UI08 416 aaPredicted RBP4.68□□□□□ -1.66
VPS50-216ENST00000484954 EDARQ9UNE0 448 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 MAPRE3Q9UPY8 281 aa4.68□□□□□ -1.66
VPS50-216ENST00000484954 ST20-MTHFSA0A0A6YYL1 179 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 TLDC2A0PJX2 215 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 KLRG2A4D1S0 409 aaPredicted RBP4.67□□□□□ -1.66
VPS50-216ENST00000484954 MTSS1O43312 755 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 FSBPO95073 299 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 LPLP06858 475 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 MCM7P33993 719 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 CASRP41180 1078 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 OCRLQ01968 901 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 MGAT5Q09328 741 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 SPIDRQ14159 915 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 ATP13A4Q4VNC1 1196 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 CT83Q5H943 113 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 CMIPQ8IY22 773 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 UNC5BQ8IZJ1 945 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 THEMISQ8N1K5 641 aaPredicted RBP4.67□□□□□ -1.66
VPS50-216ENST00000484954 ANKRD35Q8N283 1001 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 CLRN3Q8NCR9 226 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 ZG16BQ96DA0 208 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 CRAMP1Q96RY5 1269 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 GPR87Q9BY21 358 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 ZNF703Q9H7S9 590 aaPredicted RBP4.67□□□□□ -1.66
VPS50-216ENST00000484954 SLC2A4RGQ9NR83 387 aa4.67□□□□□ -1.66
VPS50-216ENST00000484954 TOPORSQ9NS56 1045 aaPredicted RBP4.67□□□□□ -1.66
VPS50-216ENST00000484954 A0A1W2PR48 441 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 FAM20BO75063 409 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 NPEPPSP55786 919 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 STRN3Q13033 797 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 TOB2Q14106 344 aaPredicted RBP4.66□□□□□ -1.66
VPS50-216ENST00000484954 DHCR24Q15392 516 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 MAN2A1Q16706 1144 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 FRMD7Q6ZUT3 714 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 C11orf74Q86VG3 221 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 ATXN2LQ8WWM7 1075 aaKnown RBP4.66□□□□□ -1.66
VPS50-216ENST00000484954 ARL8AQ96BM9 186 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 CPEB1Q9BZB8 566 aaKnown RBP4.66□□□□□ -1.66
VPS50-216ENST00000484954 MMRN2Q9H8L6 949 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 VTA1Q9NP79 307 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 PRSS50Q9UI38 385 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 NUMBLQ9Y6R0 609 aa4.66□□□□□ -1.66
VPS50-216ENST00000484954 GRXCR1A8MXD5 290 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 MAFGO15525 162 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 CYP27B1O15528 508 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 TMEM127O75204 238 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 HK1P19367 917 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 MAN2A2P49641 1150 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 INHBCP55103 352 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 TUBA3CQ13748 450 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 UBE3CQ15386 1083 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 SDE2Q6IQ49 451 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 DPY19L2P1Q6NXN4 242 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 TUBA3EQ6PEY2 450 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 ABHD15Q6UXT9 468 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 HDGFL2Q7Z4V5 671 aaPredicted RBP4.65□□□□□ -1.67
VPS50-216ENST00000484954 RASSF3Q86WH2 238 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 AMER2Q8N7J2 671 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 MDGA1Q8NFP4 955 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 USP7Q93009 1102 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 EAF2Q96CJ1 260 aaPredicted RBP4.65□□□□□ -1.67
VPS50-216ENST00000484954 MNTQ99583 582 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 KCTD10Q9H3F6 313 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 NOC2LQ9Y3T9 749 aaKnown RBP4.65□□□□□ -1.67
VPS50-216ENST00000484954 XDHP47989 1333 aa4.65□□□□□ -1.67
VPS50-216ENST00000484954 HOXA3O43365 443 aaPredicted RBP4.64□□□□□ -1.67
VPS50-216ENST00000484954 RAB11FIP3O75154 756 aa4.64□□□□□ -1.67
VPS50-216ENST00000484954 LGALS4P56470 323 aa4.64□□□□□ -1.67
VPS50-216ENST00000484954 CNGB1Q14028 1251 aaPredicted RBP4.64□□□□□ -1.67
VPS50-216ENST00000484954 LHFPL2Q6ZUX7 228 aa4.64□□□□□ -1.67
VPS50-216ENST00000484954 HTR3DQ70Z44 454 aa4.64□□□□□ -1.67
VPS50-216ENST00000484954 ZNF627Q7L945 461 aa4.64□□□□□ -1.67
VPS50-216ENST00000484954 TAS1R1Q7RTX1 841 aa4.64□□□□□ -1.67
VPS50-216ENST00000484954 GSPT2Q8IYD1 628 aaKnown RBP4.64□□□□□ -1.67
VPS50-216ENST00000484954 LILRA3Q8N6C8 439 aaPredicted RBP4.64□□□□□ -1.67
VPS50-216ENST00000484954 OR5M3Q8NGP4 307 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms