RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 CYFIP2Q96F07 1278 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 VPS11Q9H270 941 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 ADA2Q9NZK5 511 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 SNX12Q9UMY4 172 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 ARL2BPQ9Y2Y0 163 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 MROH7-TTC4A0A0A0MT08 1334 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 PPP1R12AO14974 1030 aaPredicted RBP16.1■□□□□ 0.17
RXRA-203ENST00000484822 SYF2O95926 243 aaKnown RBP16.1■□□□□ 0.17
RXRA-203ENST00000484822 EN1Q05925 392 aaPredicted RBP16.1■□□□□ 0.17
RXRA-203ENST00000484822 TRIM59Q8IWR1 403 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 RNF25Q96BH1 459 aaPredicted RBP16.1■□□□□ 0.17
RXRA-203ENST00000484822 RMDN2Q96LZ7 410 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 ZFXP17010 805 aaPredicted RBP16.1■□□□□ 0.17
RXRA-203ENST00000484822 GPC5P78333 572 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 CCDC137Q6PK04 289 aaKnown RBP16.1■□□□□ 0.17
RXRA-203ENST00000484822 SHC4Q6S5L8 630 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 CCNI2Q6ZMN8 369 aaPredicted RBP16.1■□□□□ 0.17
RXRA-203ENST00000484822 KIF2BQ8N4N8 673 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 MS4A14Q96JA4 679 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 TRIM15Q9C019 465 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 TYW5A2RUC4 315 aaKnown RBP16.1■□□□□ 0.17
RXRA-203ENST00000484822 H3BRJ5 948 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 CHN1P15882 459 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 CHRNA3P32297 505 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 IGBP1P78318 339 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 GPSM2P81274 684 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 SUGT1Q9Y2Z0 365 aa16.1■□□□□ 0.17
RXRA-203ENST00000484822 CNTNAP4Q9C0A0 1308 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 KCNA3P22001 575 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 NCAPHQ15003 741 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 STAG2Q8N3U4 1231 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 OR2W6PQ8NHA6 318 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 FAM84BQ96KN1 310 aaPredicted RBP16.09■□□□□ 0.17
RXRA-203ENST00000484822 FAM81BQ96LP2 452 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 ADAM33Q9BZ11 813 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 CD248Q9HCU0 757 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 KDM1AO60341 852 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 BRD2P25440 801 aaKnown RBP16.09■□□□□ 0.17
RXRA-203ENST00000484822 PPP1R2P3Q6NXS1 205 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 GIPC2Q8TF65 315 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 GRAMD1AQ96CP6 724 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 SEC16BQ96JE7 1060 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 WDR11Q9BZH6 1224 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 SLITRK6Q9H5Y7 841 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 ADAM22Q9P0K1 906 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 POTEMA6NI47 508 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 ZBTB7AO95365 584 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 HSPA9P38646 679 aaKnown RBP16.09■□□□□ 0.17
RXRA-203ENST00000484822 PMS1P54277 932 aaKnown RBP16.09■□□□□ 0.17
RXRA-203ENST00000484822 CAV1Q03135 178 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 KLHL38Q2WGJ6 581 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 ZNF746Q6NUN9 644 aaPredicted RBP16.09■□□□□ 0.17
RXRA-203ENST00000484822 SCARA5Q6ZMJ2 495 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 KIAA2013Q8IYS2 634 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 ZBED8Q8IZ13 594 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 CDC26Q8NHZ8 85 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 ATP6V0A1Q93050 837 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 CEP170P1Q96L14 293 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 TTC25Q96NG3 672 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 APOL6Q9BWW8 343 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 DDX28Q9NUL7 540 aaKnown RBP16.09■□□□□ 0.17
RXRA-203ENST00000484822 PAIP2BQ9ULR5 123 aaKnown RBP16.09■□□□□ 0.17
RXRA-203ENST00000484822 PSMA2P25787 234 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 KDSRQ06136 332 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 BYSLQ13895 437 aaKnown RBP16.09■□□□□ 0.17
RXRA-203ENST00000484822 MORF4L2Q15014 288 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 ACAD11Q709F0 780 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 ANKRD36BP1Q96IX9 119 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 SLC13A1Q9BZW2 595 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 FER1L4A9Z1Z3 1794 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 PPLO60437 1756 aa16.09■□□□□ 0.17
RXRA-203ENST00000484822 SPDYE2BA6NHP3 402 aa16.08■□□□□ 0.17
RXRA-203ENST00000484822 INO80B-WBP1J3KQ70 363 aa16.08■□□□□ 0.17
RXRA-203ENST00000484822 SPDYE6P0CI01 402 aa16.08■□□□□ 0.17
RXRA-203ENST00000484822 NEK2P51955 445 aa16.08■□□□□ 0.17
RXRA-203ENST00000484822 RCAN1P53805 252 aa16.08■□□□□ 0.17
RXRA-203ENST00000484822 YWHAHQ04917 246 aaPredicted RBP16.08■□□□□ 0.17
RXRA-203ENST00000484822 DACH2Q96NX9 599 aa16.08■□□□□ 0.17
RXRA-203ENST00000484822 INO80BQ9C086 356 aaPredicted RBP16.08■□□□□ 0.17
RXRA-203ENST00000484822 SLC40A1Q9NP59 571 aa16.08■□□□□ 0.17
RXRA-203ENST00000484822 PSD3Q9NYI0 1048 aa16.08■□□□□ 0.17
RXRA-203ENST00000484822 STX18Q9P2W9 335 aaKnown RBP16.08■□□□□ 0.17
RXRA-203ENST00000484822 CTTNQ14247 550 aaKnown RBP16.08■□□□□ 0.16
RXRA-203ENST00000484822 APOBEC3FQ8IUX4 373 aaKnown RBP16.08■□□□□ 0.16
RXRA-203ENST00000484822 LINC00116Q8NCU8 138 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 SLC7A3Q8WY07 619 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 NCLNQ969V3 563 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 THAP11Q96EK4 314 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 KIFC3Q9BVG8 833 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 NGRNQ9NPE2 291 aaKnown RBP16.08■□□□□ 0.16
RXRA-203ENST00000484822 DCP1AQ9NPI6 582 aaPredicted RBP16.08■□□□□ 0.16
RXRA-203ENST00000484822 PNMA6FA0A0J9YX94 578 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 FAM187AA6NFU0 413 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 GOLGA8CPA6NN73 597 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 CSF1RP07333 972 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 PDIA2Q13087 525 aaKnown RBP16.08■□□□□ 0.16
RXRA-203ENST00000484822 PPP6R3Q5H9R7 873 aaPredicted RBP16.08■□□□□ 0.16
RXRA-203ENST00000484822 OLFML2BQ68BL8 750 aa16.08■□□□□ 0.16
RXRA-203ENST00000484822 KLC2Q9H0B6 622 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms