RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 MRPL42Q9Y6G3 142 aaKnown RBP5.91□□□□□ -1.46
SMC4-215ENST00000484799 HOXA3O43365 443 aaPredicted RBP5.9□□□□□ -1.46
SMC4-215ENST00000484799 RAMP2O60895 175 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 PPFIA2O75334 1257 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 MYCLP1P12525 358 aaPredicted RBP5.9□□□□□ -1.46
SMC4-215ENST00000484799 LSSP48449 732 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 MGAT5Q09328 741 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 DDB1Q16531 1140 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 TKFCQ3LXA3 575 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 CCDC178Q5BJE1 867 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 RABL3Q5HYI8 236 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 CRB2Q5IJ48 1285 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 IGFL4Q6B9Z1 124 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 GLB1L2Q8IW92 636 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 UNC5BQ8IZJ1 945 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 AMER2Q8N7J2 671 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 SMC1BQ8NDV3 1235 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 MDGA1Q8NFP4 955 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 CPT1CQ8TCG5 803 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 SLC25A43Q8WUT9 341 aaPredicted RBP5.9□□□□□ -1.46
SMC4-215ENST00000484799 HAPLN2Q9GZV7 340 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 CLCA2Q9UQC9 943 aa5.9□□□□□ -1.46
SMC4-215ENST00000484799 ELL2O00472 640 aaPredicted RBP5.89□□□□□ -1.47
SMC4-215ENST00000484799 CLSTN1O94985 981 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 CASRP41180 1078 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 PURAQ00577 322 aaKnown RBP5.89□□□□□ -1.47
SMC4-215ENST00000484799 PPARAQ07869 468 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 PTPAQ15257 358 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 ATP13A4Q4VNC1 1196 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 CREB3L3Q68CJ9 461 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 DDX46Q7L014 1031 aaKnown RBP5.89□□□□□ -1.47
SMC4-215ENST00000484799 MRGPRGQ86SM5 289 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 ZNF276Q8N554 614 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 PRRX2Q99811 253 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 WNT8AQ9H1J5 351 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 SORCS3Q9UPU3 1222 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 NUMBLQ9Y6R0 609 aa5.89□□□□□ -1.47
SMC4-215ENST00000484799 PRSS38A1L453 326 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 PRR5-ARHGAP8B1AHC4 643 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 KDM1AO60341 852 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 DNAJC6O75061 913 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 SCAF4O95104 1147 aaKnown RBP5.88□□□□□ -1.47
SMC4-215ENST00000484799 LY86O95711 162 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 ADAM8P78325 824 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 PHC1P78364 1004 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 TERF2Q15554 542 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 DALRD3Q5D0E6 543 aaKnown RBP5.88□□□□□ -1.47
SMC4-215ENST00000484799 FNDC7Q5VTL7 733 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 BROXQ5VW32 411 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 TAS1R1Q7RTX1 841 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 IL17RAQ96F46 866 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 CDC5LQ99459 802 aaKnown RBP5.88□□□□□ -1.47
SMC4-215ENST00000484799 SPON1Q9HCB6 807 aa5.88□□□□□ -1.47
SMC4-215ENST00000484799 A0A0A6YYK5 440 aaPredicted RBP5.87□□□□□ -1.47
SMC4-215ENST00000484799 TGM5O43548 720 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 PRAMEF4O60810 478 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 GYPEP15421 78 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 FSTL1Q12841 308 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 DCAF17Q5H9S7 520 aaPredicted RBP5.87□□□□□ -1.47
SMC4-215ENST00000484799 LY6G5CQ5SRR4 150 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 CCDC62Q6P9F0 684 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 FAM180AQ6UWF9 173 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 NOP9Q86U38 636 aaKnown RBP5.87□□□□□ -1.47
SMC4-215ENST00000484799 OR14C36Q8NHC7 312 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 LARP4BQ92615 738 aaKnown RBP5.87□□□□□ -1.47
SMC4-215ENST00000484799 SLC5A5Q92911 643 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 SOX7Q9BT81 388 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 TTPALQ9BTX7 342 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 IKZF4Q9H2S9 585 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 USP35Q9P2H5 1018 aa5.87□□□□□ -1.47
SMC4-215ENST00000484799 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.86□□□□□ -1.47
SMC4-215ENST00000484799 PDE8AO60658 829 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 PFKMP08237 780 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 CLEC2LP0C7M8 214 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 GZMKP49863 264 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 WNT3AP56704 352 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 INHBEP58166 350 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 TOB2Q14106 344 aaPredicted RBP5.86□□□□□ -1.47
SMC4-215ENST00000484799 SMN1Q16637 294 aaKnown RBP5.86□□□□□ -1.47
SMC4-215ENST00000484799 FAM214AQ32MH5 1076 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 TIGD2Q4W5G0 525 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 IQSEC1Q6DN90 963 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 LAIR1Q6GTX8 287 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 KCNV1Q6PIU1 500 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 PDZD4Q76G19 769 aaPredicted RBP5.86□□□□□ -1.47
SMC4-215ENST00000484799 RASSF3Q86WH2 238 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 CXorf67Q86X51 503 aaPredicted RBP5.86□□□□□ -1.47
SMC4-215ENST00000484799 ZG16BQ96DA0 208 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 PAWRQ96IZ0 340 aaKnown RBP5.86□□□□□ -1.47
SMC4-215ENST00000484799 TTC1Q99614 292 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 POGKQ9P215 609 aa5.86□□□□□ -1.47
SMC4-215ENST00000484799 KLRG2A4D1S0 409 aaPredicted RBP5.85□□□□□ -1.47
SMC4-215ENST00000484799 OVOL3O00110 214 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 ULK1O75385 1050 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 STC2O76061 302 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 LTA4HP09960 611 aaKnown RBP5.85□□□□□ -1.47
SMC4-215ENST00000484799 ADCYAP1R1P41586 468 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 RABGGTBP53611 331 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 APBA1Q02410 837 aa5.85□□□□□ -1.47
SMC4-215ENST00000484799 UBE3CQ15386 1083 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms