RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 LIG1P18858 919 aa29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 NPTX2P47972 431 aa29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 SHC4Q6S5L8 630 aa29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 CDR2LQ86X02 465 aaPredicted RBP29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 REEP2Q9BRK0 252 aa29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 FZD8Q9H461 694 aa29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 PRMT7Q9NVM4 692 aaPredicted RBP29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 HCSTQ9UBK5 93 aa29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 STK17AQ9UEE5 414 aa29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 RCOR1Q9UKL0 485 aa29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 PCDHA7Q9UN72 937 aa29.26■■■□□ 2.27
GTF3C4-202ENST00000483873 CCDC169A6NNP5 214 aa29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 MEIS3P2A8K0S8 358 aa29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 FOSL2P15408 326 aa29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 NCLP19338 710 aaKnown RBP29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 AXLP30530 894 aa29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 DMP1Q13316 513 aaPredicted RBP29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 CLLU1OSQ5K130 101 aa29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 NOTUMQ6P988 496 aa29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 PPP4R3CPQ6ZMV5 832 aa29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 PDILTQ8N807 584 aa29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 GDPD5Q8WTR4 605 aa29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 EIF2AQ9BY44 585 aaKnown RBP29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 STXBP5LQ9Y2K9 1186 aa29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 PCDHB2Q9Y5E7 798 aa29.25■■■□□ 2.27
GTF3C4-202ENST00000483873 EOMESO95936 686 aa29.24■■■□□ 2.27
GTF3C4-202ENST00000483873 PRKCBP05771 671 aa29.24■■■□□ 2.27
GTF3C4-202ENST00000483873 ME1P48163 572 aa29.24■■■□□ 2.27
GTF3C4-202ENST00000483873 FAM187BQ17R55 369 aa29.24■■■□□ 2.27
GTF3C4-202ENST00000483873 EPC2Q52LR7 807 aa29.24■■■□□ 2.27
GTF3C4-202ENST00000483873 TMEM192Q8IY95 271 aa29.24■■■□□ 2.27
GTF3C4-202ENST00000483873 CASD1Q96PB1 797 aa29.24■■■□□ 2.27
GTF3C4-202ENST00000483873 GAS2L1Q99501 681 aaPredicted RBP29.24■■■□□ 2.27
GTF3C4-202ENST00000483873 RAB27AP51159 221 aa29.23■■■□□ 2.27
GTF3C4-202ENST00000483873 MAPK6Q16659 721 aa29.23■■■□□ 2.27
GTF3C4-202ENST00000483873 HELQQ8TDG4 1101 aa29.23■■■□□ 2.27
GTF3C4-202ENST00000483873 CLP1Q92989 425 aaKnown RBP29.23■■■□□ 2.27
GTF3C4-202ENST00000483873 KMT5AQ9NQR1 393 aa29.23■■■□□ 2.27
GTF3C4-202ENST00000483873 CNTNAP2Q9UHC6 1331 aa29.23■■■□□ 2.27
GTF3C4-202ENST00000483873 ZNF623O75123 536 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 SKIP12755 728 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 CTNNB1P35222 781 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 STAT6P42226 847 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 KRT85P78386 507 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 NCBP1Q09161 790 aaKnown RBP29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 GIT2Q14161 759 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 CCDC73Q6ZRK6 1079 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 FBXO22Q8NEZ5 403 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 LEO1Q8WVC0 666 aaPredicted RBP29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 PRIMPOLQ96LW4 560 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 TMEM117Q9H0C3 514 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 C17orf75Q9HAS0 396 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 ATG2AQ2TAZ0 1938 aa29.22■■■□□ 2.27
GTF3C4-202ENST00000483873 SLC16A4O15374 487 aa29.21■■■□□ 2.27
GTF3C4-202ENST00000483873 LPXNO60711 386 aa29.21■■■□□ 2.27
GTF3C4-202ENST00000483873 PLS3P13797 630 aa29.21■■■□□ 2.27
GTF3C4-202ENST00000483873 TAS1R3Q7RTX0 852 aa29.21■■■□□ 2.27
GTF3C4-202ENST00000483873 SMG8Q8ND04 991 aaKnown RBP29.21■■■□□ 2.27
GTF3C4-202ENST00000483873 CCDC51Q96ER9 411 aa29.21■■■□□ 2.27
GTF3C4-202ENST00000483873 SAMD11Q96NU1 681 aa29.21■■■□□ 2.27
GTF3C4-202ENST00000483873 ARHGAP28Q9P2N2 729 aa29.21■■■□□ 2.27
GTF3C4-202ENST00000483873 ODF2LQ9ULJ1 636 aa29.21■■■□□ 2.27
GTF3C4-202ENST00000483873 REV3LO60673 3130 aa29.21■■■□□ 2.27
GTF3C4-202ENST00000483873 A0A1B0GUA9 196 aa29.2■■■□□ 2.27
GTF3C4-202ENST00000483873 ACKR2O00590 384 aa29.2■■■□□ 2.27
GTF3C4-202ENST00000483873 HOXA2O43364 376 aa29.2■■■□□ 2.27
GTF3C4-202ENST00000483873 KRT18P05783 430 aaKnown RBP29.2■■■□□ 2.27
GTF3C4-202ENST00000483873 IGFBP4P22692 258 aa29.2■■■□□ 2.27
GTF3C4-202ENST00000483873 EFNA5P52803 228 aa29.2■■■□□ 2.27
GTF3C4-202ENST00000483873 NUCB2P80303 420 aa29.2■■■□□ 2.27
GTF3C4-202ENST00000483873 PRPF4BQ13523 1007 aaKnown RBP29.2■■■□□ 2.27
GTF3C4-202ENST00000483873 ATP6V1DQ9Y5K8 247 aa29.2■■■□□ 2.27
GTF3C4-202ENST00000483873 PLXNA4Q9HCM2 1894 aa29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 PHLPP2Q6ZVD8 1323 aa29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 NPTXRO95502 500 aa29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 AGMOQ6ZNB7 445 aa29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 LRRC55Q6ZSA7 311 aa29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 MRPL10Q7Z7H8 261 aaKnown RBP29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 ABI1Q8IZP0 508 aa29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 SPATA32Q96LK8 384 aa29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 PDZD7Q9H5P4 517 aa29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 TYW1Q9NV66 732 aaKnown RBP29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 HES2Q9Y543 173 aa29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 IPPQ9Y573 584 aa29.2■■■□□ 2.26
GTF3C4-202ENST00000483873 MYMKA6NI61 221 aa29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 K7ERI5 159 aa29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 FAM13AO94988 1023 aa29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 BMPR1AP36894 532 aa29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 E2F4Q16254 413 aa29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 NT5DC1Q5TFE4 455 aa29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 SLC27A1Q6PCB7 646 aa29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 SV2BQ7L1I2 683 aa29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 DYMQ7RTS9 669 aa29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 SPIRE2Q8WWL2 714 aa29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 NTPCRQ9BSD7 190 aaKnown RBP29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 CWH43Q9H720 699 aa29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 CIZ1Q9ULV3 898 aaPredicted RBP29.19■■■□□ 2.26
GTF3C4-202ENST00000483873 ZNF131P52739 623 aa29.18■■■□□ 2.26
GTF3C4-202ENST00000483873 TMEM132AQ24JP5 1023 aa29.18■■■□□ 2.26
GTF3C4-202ENST00000483873 RESP18Q5W5W9 173 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms