RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 RGS2P41220 211 aa28.59■■■□□ 2.17
SHOX2-204ENST00000483851 VAMP7P51809 220 aa28.59■■■□□ 2.17
SHOX2-204ENST00000483851 RRAGAQ7L523 313 aa28.59■■■□□ 2.17
SHOX2-204ENST00000483851 USP37Q86T82 979 aa28.59■■■□□ 2.17
SHOX2-204ENST00000483851 AFG1LQ8WV93 481 aa28.59■■■□□ 2.17
SHOX2-204ENST00000483851 FANCGO15287 622 aa28.59■■■□□ 2.17
SHOX2-204ENST00000483851 ALDH1A1P00352 501 aa28.59■■■□□ 2.17
SHOX2-204ENST00000483851 SLFN12LQ6IEE8 588 aa28.59■■■□□ 2.17
SHOX2-204ENST00000483851 DPY19L2P1Q6NXN4 242 aa28.59■■■□□ 2.17
SHOX2-204ENST00000483851 SLC39A4Q6P5W5 647 aa28.59■■■□□ 2.17
SHOX2-204ENST00000483851 ZHX1Q9UKY1 873 aaPredicted RBP28.59■■■□□ 2.17
SHOX2-204ENST00000483851 LRRC53A6NM62 1247 aa28.58■■■□□ 2.17
SHOX2-204ENST00000483851 ASAP2O43150 1006 aa28.58■■■□□ 2.17
SHOX2-204ENST00000483851 POLR2FP61218 127 aaKnown RBP28.58■■■□□ 2.17
SHOX2-204ENST00000483851 CAPSQ13938 189 aa28.58■■■□□ 2.17
SHOX2-204ENST00000483851 KLHDC7AQ5VTJ3 777 aa28.58■■■□□ 2.17
SHOX2-204ENST00000483851 PRPF31Q8WWY3 499 aaKnown RBP28.58■■■□□ 2.17
SHOX2-204ENST00000483851 GCNT4Q9P109 453 aa28.58■■■□□ 2.17
SHOX2-204ENST00000483851 DOCK3Q8IZD9 2030 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.57■■■□□ 2.16
SHOX2-204ENST00000483851 MAGEB2O15479 319 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 LIG4P49917 911 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 CETN1Q12798 172 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 CRHR2Q13324 411 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 SNRNP35Q16560 246 aaKnown RBP28.57■■■□□ 2.16
SHOX2-204ENST00000483851 GJC2Q5T442 439 aaPredicted RBP28.57■■■□□ 2.16
SHOX2-204ENST00000483851 TMC2Q8TDI7 906 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 POMGNT1Q8WZA1 660 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 BICD1Q96G01 975 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 ERO1AQ96HE7 468 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 DESI2Q9BSY9 194 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 C2orf40Q9H1Z8 148 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 SLC9A1P19634 815 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 KRT83P78385 493 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 TNFAIP2Q03169 654 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 CDCA2Q69YH5 1023 aaPredicted RBP28.57■■■□□ 2.16
SHOX2-204ENST00000483851 RDH13Q8NBN7 331 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 APBA2Q99767 749 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 C16orf70Q9BSU1 422 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 NHEJ1Q9H9Q4 299 aaPredicted RBP28.57■■■□□ 2.16
SHOX2-204ENST00000483851 GJD2Q9UKL4 321 aa28.57■■■□□ 2.16
SHOX2-204ENST00000483851 EIF3CLB5ME19 914 aaKnown RBP28.56■■■□□ 2.16
SHOX2-204ENST00000483851 SLU7O95391 586 aaKnown RBP28.56■■■□□ 2.16
SHOX2-204ENST00000483851 UCHL3P15374 230 aa28.56■■■□□ 2.16
SHOX2-204ENST00000483851 SFMBT2Q5VUG0 894 aa28.56■■■□□ 2.16
SHOX2-204ENST00000483851 GPD1LQ8N335 351 aa28.56■■■□□ 2.16
SHOX2-204ENST00000483851 OR6J1Q8NGC5 347 aa28.56■■■□□ 2.16
SHOX2-204ENST00000483851 MFSD14AQ96MC6 490 aa28.56■■■□□ 2.16
SHOX2-204ENST00000483851 EIF3CQ99613 913 aaKnown RBP28.56■■■□□ 2.16
SHOX2-204ENST00000483851 RNPEPQ9H4A4 650 aa28.56■■■□□ 2.16
SHOX2-204ENST00000483851 AIPL1Q9NZN9 384 aa28.56■■■□□ 2.16
SHOX2-204ENST00000483851 SSU72P8A0A1W2PR75 194 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 IGHA2P01877 340 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 TFDP1Q14186 410 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 NAA30Q147X3 362 aaPredicted RBP28.55■■■□□ 2.16
SHOX2-204ENST00000483851 DGKDQ16760 1214 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 ZPBP2Q6X784 338 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 TNPO2O14787 897 aaKnown RBP28.55■■■□□ 2.16
SHOX2-204ENST00000483851 IPO7O95373 1038 aaKnown RBP28.55■■■□□ 2.16
SHOX2-204ENST00000483851 MMP3P08254 477 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 RFX1P22670 979 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 MYL7Q01449 175 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 POU5F1BQ06416 359 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 LAMTOR4Q0VGL1 99 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 MKRN4PQ13434 485 aaPredicted RBP28.55■■■□□ 2.16
SHOX2-204ENST00000483851 ZNF662Q6ZS27 426 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 FMNL3Q8IVF7 1028 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 ZBTB8OSQ8IWT0 167 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 REM2Q8IYK8 340 aaPredicted RBP28.55■■■□□ 2.16
SHOX2-204ENST00000483851 CCDC42Q96M95 316 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 SUGCTQ9HAC7 445 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 SIX2Q9NPC8 291 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 NLRC4Q9NPP4 1024 aa28.55■■■□□ 2.16
SHOX2-204ENST00000483851 LDHAP00338 332 aaKnown RBP28.54■■■□□ 2.16
SHOX2-204ENST00000483851 GTF2H1P32780 548 aa28.54■■■□□ 2.16
SHOX2-204ENST00000483851 MAPK8IP2Q13387 824 aaPredicted RBP28.54■■■□□ 2.16
SHOX2-204ENST00000483851 SUCLA2Q9P2R7 463 aaPredicted RBP28.54■■■□□ 2.16
SHOX2-204ENST00000483851 DNAI1Q9UI46 699 aa28.54■■■□□ 2.16
SHOX2-204ENST00000483851 H3BRB1 525 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 TOMM70O94826 608 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 C22orf31O95567 290 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 TRIM49P0CI25 452 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 TRIM49CP0CI26 452 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 INSRRP14616 1297 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 DRP2Q13474 957 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 SLC9C1Q4G0N8 1177 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 CBWD6Q4V339 395 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 CBWD3Q5JTY5 395 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 CBWD5Q5RIA9 395 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 TUT1Q9H6E5 874 aaKnown RBP28.53■■■□□ 2.16
SHOX2-204ENST00000483851 GNEQ9Y223 722 aaKnown RBP28.53■■■□□ 2.16
SHOX2-204ENST00000483851 USP20Q9Y2K6 914 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 Q9Y3F1 56 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 A6NJR5 290 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 EXTL3O43909 919 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 SERPING1P05155 500 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 ZNF865P0CJ78 1059 aaPredicted RBP28.53■■■□□ 2.16
SHOX2-204ENST00000483851 EFCAB12Q6NXP0 572 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 CBWD2Q8IUF1 395 aa28.53■■■□□ 2.16
SHOX2-204ENST00000483851 VTI1AQ96AJ9 217 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms