RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ARF4P18085 180 aaPredicted RBP23.06■■□□□ 1.28
SEC13-217ENST00000482647 LIG1P18858 919 aa23.06■■□□□ 1.28
SEC13-217ENST00000482647 CACNB1Q02641 598 aaPredicted RBP23.06■■□□□ 1.28
SEC13-217ENST00000482647 PRPF4BQ13523 1007 aaKnown RBP23.06■■□□□ 1.28
SEC13-217ENST00000482647 GIT2Q14161 759 aa23.06■■□□□ 1.28
SEC13-217ENST00000482647 RESP18Q5W5W9 173 aa23.06■■□□□ 1.28
SEC13-217ENST00000482647 ZNF598Q86UK7 904 aaKnown RBP23.06■■□□□ 1.28
SEC13-217ENST00000482647 CPB2Q96IY4 423 aa23.06■■□□□ 1.28
SEC13-217ENST00000482647 CCDC113Q9H0I3 377 aa23.06■■□□□ 1.28
SEC13-217ENST00000482647 CUEDC2Q9H467 287 aa23.06■■□□□ 1.28
SEC13-217ENST00000482647 PCDHB2Q9Y5E7 798 aa23.06■■□□□ 1.28
SEC13-217ENST00000482647 A0A1B0GUA9 196 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 B4GALT5O43286 388 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 TBCAO75347 108 aaKnown RBP23.05■■□□□ 1.28
SEC13-217ENST00000482647 FAM13AO94988 1023 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 PRKCBP05771 671 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 ERVK-21P61565 698 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 TMEM132AQ24JP5 1023 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 ADALQ6DHV7 355 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 ABI1Q8IZP0 508 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 MYCT1Q8N699 235 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 PGBD4Q96DM1 585 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 TMEM134Q9H6X4 195 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 CERS4Q9HA82 394 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 PARVGQ9HBI0 331 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 ARHGAP28Q9P2N2 729 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 MYH15Q9Y2K3 1946 aa23.05■■□□□ 1.28
SEC13-217ENST00000482647 TBKBP1A7MCY6 615 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 SLC16A4O15374 487 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 FGFR1P11362 822 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 CMA1P23946 247 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 UBXN11Q5T124 520 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 CNNM3Q8NE01 707 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 ARNTL2Q8WYA1 636 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 DHX58Q96C10 678 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 GUCD1Q96NT3 240 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 SAMD11Q96NU1 681 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 CDX2Q99626 313 aaPredicted RBP23.04■■□□□ 1.28
SEC13-217ENST00000482647 PYM1Q9BRP8 204 aaKnown RBP23.04■■□□□ 1.28
SEC13-217ENST00000482647 TRIM6Q9C030 488 aaPredicted RBP23.04■■□□□ 1.28
SEC13-217ENST00000482647 LRRC27Q9C0I9 530 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 TMEM117Q9H0C3 514 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 ZHX3Q9H4I2 956 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 CNTNAP2Q9UHC6 1331 aa23.04■■□□□ 1.28
SEC13-217ENST00000482647 CDH23Q9H251 3354 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 H0YCG3 227 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 POLR2DO15514 142 aaKnown RBP23.03■■□□□ 1.28
SEC13-217ENST00000482647 ATF7P17544 494 aaPredicted RBP23.03■■□□□ 1.28
SEC13-217ENST00000482647 SCP2P22307 547 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 GATMP50440 423 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 ZNF131P52739 623 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 E2F4Q16254 413 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 PAN2Q504Q3 1202 aaKnown RBP23.03■■□□□ 1.28
SEC13-217ENST00000482647 SLC27A1Q6PCB7 646 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 MRPL10Q7Z7H8 261 aaKnown RBP23.03■■□□□ 1.28
SEC13-217ENST00000482647 DDX12PQ92771 950 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 PRDM12Q9H4Q4 367 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 MTUS1Q9ULD2 1270 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 KCNH3Q9ULD8 1083 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 RWDD3Q9Y3V2 267 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 PTPRSQ13332 1948 aa23.03■■□□□ 1.28
SEC13-217ENST00000482647 MYMKA6NI61 221 aa23.02■■□□□ 1.28
SEC13-217ENST00000482647 AMPD3Q01432 767 aa23.02■■□□□ 1.28
SEC13-217ENST00000482647 STRN3Q13033 797 aa23.02■■□□□ 1.28
SEC13-217ENST00000482647 DYMQ7RTS9 669 aa23.02■■□□□ 1.28
SEC13-217ENST00000482647 HACE1Q8IYU2 909 aa23.02■■□□□ 1.28
SEC13-217ENST00000482647 TMEM161BQ8NDZ6 487 aa23.02■■□□□ 1.28
SEC13-217ENST00000482647 RSPH1Q8WYR4 309 aa23.02■■□□□ 1.28
SEC13-217ENST00000482647 CLP1Q92989 425 aaKnown RBP23.02■■□□□ 1.28
SEC13-217ENST00000482647 C17orf80Q9BSJ5 609 aa23.02■■□□□ 1.28
SEC13-217ENST00000482647 EIF2AQ9BY44 585 aaKnown RBP23.02■■□□□ 1.28
SEC13-217ENST00000482647 N4BP3O15049 544 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 LONRF3Q496Y0 759 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 GLB1LQ6UWU2 654 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 SPRED2Q7Z698 418 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 TMEM192Q8IY95 271 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 LPPQ93052 612 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 CASD1Q96PB1 797 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 TNMDQ9H2S6 317 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 UBN1Q9NPG3 1134 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 RNF19AQ9NV58 838 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 KBTBD4Q9NVX7 518 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 IPPQ9Y573 584 aa23.01■■□□□ 1.27
SEC13-217ENST00000482647 MRPL42Q9Y6G3 142 aaKnown RBP23.01■■□□□ 1.27
SEC13-217ENST00000482647 COL4A6Q14031 1691 aa23■■□□□ 1.27
SEC13-217ENST00000482647 TTLL13PA6NNM8 815 aa23■■□□□ 1.27
SEC13-217ENST00000482647 TRAK2O60296 914 aa23■■□□□ 1.27
SEC13-217ENST00000482647 MAPTP10636 758 aaKnown RBP23■■□□□ 1.27
SEC13-217ENST00000482647 NCKAP1LP55160 1127 aa23■■□□□ 1.27
SEC13-217ENST00000482647 EPC2Q52LR7 807 aa23■■□□□ 1.27
SEC13-217ENST00000482647 CLLU1OSQ5K130 101 aa23■■□□□ 1.27
SEC13-217ENST00000482647 NT5DC1Q5TFE4 455 aa23■■□□□ 1.27
SEC13-217ENST00000482647 CDR2LQ86X02 465 aaPredicted RBP23■■□□□ 1.27
SEC13-217ENST00000482647 SMG8Q8ND04 991 aaKnown RBP23■■□□□ 1.27
SEC13-217ENST00000482647 HELQQ8TDG4 1101 aa23■■□□□ 1.27
SEC13-217ENST00000482647 MYLIPQ8WY64 445 aa23■■□□□ 1.27
SEC13-217ENST00000482647 GAS2L1Q99501 681 aaPredicted RBP23■■□□□ 1.27
SEC13-217ENST00000482647 ADPGKQ9BRR6 497 aa23■■□□□ 1.27
SEC13-217ENST00000482647 MRPL4Q9BYD3 311 aaKnown RBP23■■□□□ 1.27
SEC13-217ENST00000482647 PDZD7Q9H5P4 517 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms