RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 COLGALT1Q8NBJ5 622 aa8.66□□□□□ -1.02
CCNC-204ENST00000482541 MICAL1Q8TDZ2 1067 aa8.66□□□□□ -1.02
CCNC-204ENST00000482541 PRPF31Q8WWY3 499 aaKnown RBP8.66□□□□□ -1.02
CCNC-204ENST00000482541 PSPC1Q8WXF1 523 aaKnown RBP8.66□□□□□ -1.02
CCNC-204ENST00000482541 DYDC2Q96IM9 177 aa8.66□□□□□ -1.02
CCNC-204ENST00000482541 MTMR9Q96QG7 549 aa8.66□□□□□ -1.02
CCNC-204ENST00000482541 TLR9Q9NR96 1032 aa8.66□□□□□ -1.02
CCNC-204ENST00000482541 SH2B1Q9NRF2 756 aaPredicted RBP8.66□□□□□ -1.02
CCNC-204ENST00000482541 RNF19AQ9NV58 838 aa8.66□□□□□ -1.02
CCNC-204ENST00000482541 RGL1Q9NZL6 768 aa8.66□□□□□ -1.02
CCNC-204ENST00000482541 PRKAG3Q9UGI9 489 aa8.66□□□□□ -1.02
CCNC-204ENST00000482541 PUF60Q9UHX1 559 aaKnown RBP8.66□□□□□ -1.02
CCNC-204ENST00000482541 COL4A3BPQ9Y5P4 624 aa8.66□□□□□ -1.02
CCNC-204ENST00000482541 VCANP13611 3396 aa8.65□□□□□ -1.02
CCNC-204ENST00000482541 NEMFO60524 1076 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 NDUFV2P19404 249 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 IRS1P35568 1242 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 PPM1AP35813 382 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 TXKP42681 527 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 PHKA2P46019 1235 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 GCGRP47871 477 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 RAB27AP51159 221 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 POU5F1BQ06416 359 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 CTTNQ14247 550 aaKnown RBP8.65□□□□□ -1.03
CCNC-204ENST00000482541 MXD4Q14582 209 aaPredicted RBP8.65□□□□□ -1.03
CCNC-204ENST00000482541 PCBP1Q15365 356 aaKnown RBP eCLIP8.65□□□□□ -1.03
CCNC-204ENST00000482541 KCNT2Q6UVM3 1135 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 KSR1Q8IVT5 923 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 GJD3Q8N144 294 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 EFHBQ8N7U6 833 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 MRPS27Q92552 414 aaKnown RBP8.65□□□□□ -1.03
CCNC-204ENST00000482541 C8orf76Q96K31 380 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 NLRP4Q96MN2 994 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 CDCA3Q99618 268 aaPredicted RBP8.65□□□□□ -1.03
CCNC-204ENST00000482541 KIF2CQ99661 725 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 EIF2AK1Q9BQI3 630 aaKnown RBP8.65□□□□□ -1.03
CCNC-204ENST00000482541 MRPL9Q9BYD2 267 aaKnown RBP8.65□□□□□ -1.03
CCNC-204ENST00000482541 FOXP1Q9H334 677 aaPredicted RBP8.65□□□□□ -1.03
CCNC-204ENST00000482541 IGFLR1Q9H665 355 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 ANKEF1Q9NU02 776 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 ATG2AQ2TAZ0 1938 aa8.65□□□□□ -1.03
CCNC-204ENST00000482541 PLXNA4Q9HCM2 1894 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 DGAT1O75907 488 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 SRGAP2CP0DJJ0 459 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 ATF7P17544 494 aaPredicted RBP8.64□□□□□ -1.03
CCNC-204ENST00000482541 GTF2F1P35269 517 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCNC-204ENST00000482541 ALDH7A1P49419 539 aaKnown RBP8.64□□□□□ -1.03
CCNC-204ENST00000482541 RBM25P49756 843 aaKnown RBP8.64□□□□□ -1.03
CCNC-204ENST00000482541 CYP4A11Q02928 519 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 DLX2Q07687 328 aaPredicted RBP8.64□□□□□ -1.03
CCNC-204ENST00000482541 LAMTOR4Q0VGL1 99 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 ORC2Q13416 577 aaPredicted RBP8.64□□□□□ -1.03
CCNC-204ENST00000482541 C8orf34Q49A92 452 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 CLLU1OSQ5K130 101 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 TWF2Q6IBS0 349 aaKnown RBP8.64□□□□□ -1.03
CCNC-204ENST00000482541 CATSPER4Q7RTX7 472 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 ADGRD2Q7Z7M1 963 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 FERMT3Q86UX7 667 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 CCDC83Q8IWF9 413 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 RNF169Q8NCN4 708 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 FBXO18Q8NFZ0 1043 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 TMEM143Q96AN5 459 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 PGBD4Q96DM1 585 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 ZNF558Q96NG5 402 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 MTRQ99707 1265 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 TLE6Q9H808 572 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 CD320Q9NPF0 282 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 AGPAT5Q9NUQ2 364 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 FAM105AQ9NUU6 356 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 SPG21Q9NZD8 308 aa8.64□□□□□ -1.03
CCNC-204ENST00000482541 XIRP2A4UGR9 3374 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 PI4K2BG5E9Z4 385 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 FSCN2O14926 492 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 ZBTB39O15060 712 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 MBTPS2O43462 519 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 EYA4O95677 639 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 NRIP1P48552 1158 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 ERVFC1P60507 584 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 COASYQ13057 564 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 EMC2Q15006 297 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 SMAD2Q15796 467 aaKnown RBP8.63□□□□□ -1.03
CCNC-204ENST00000482541 RNF149Q8NC42 400 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 CNNM3Q8NE01 707 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 HELQQ8TDG4 1101 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 MSLNLQ96KJ4 702 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 EPHX3Q9H6B9 360 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 TUFT1Q9NNX1 390 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 NGRNQ9NPE2 291 aaKnown RBP8.63□□□□□ -1.03
CCNC-204ENST00000482541 HCSTQ9UBK5 93 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 CD207Q9UJ71 328 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 PIN4Q9Y237 131 aaKnown RBP8.63□□□□□ -1.03
CCNC-204ENST00000482541 MYO7AQ13402 2215 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 WNT7AO00755 349 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 LINC01565O15544 149 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 TBX10O75333 385 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 CSPG5O95196 566 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 ALADP13716 330 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 AXLP30530 894 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 MCM7P33993 719 aa8.63□□□□□ -1.03
CCNC-204ENST00000482541 TRAPPC10P48553 1259 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms