RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 C11orf70Q9BRQ4 267 aa9.85□□□□□ -0.83
CALD1-220ENST00000482470 VIPAS39Q9H9C1 493 aa9.85□□□□□ -0.83
CALD1-220ENST00000482470 NXF1Q9UBU9 619 aaKnown RBP9.85□□□□□ -0.83
CALD1-220ENST00000482470 ALG6Q9Y672 507 aa9.85□□□□□ -0.83
CALD1-220ENST00000482470 NR3C2P08235 984 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 SEC24CP53992 1094 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 MAGOHP61326 146 aaKnown RBP9.84□□□□□ -0.83
CALD1-220ENST00000482470 TFAMQ00059 246 aaKnown RBP9.84□□□□□ -0.83
CALD1-220ENST00000482470 SNRNP35Q16560 246 aaKnown RBP9.84□□□□□ -0.83
CALD1-220ENST00000482470 TKFCQ3LXA3 575 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 CYP4F22Q6NT55 531 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 IL31RAQ8NI17 732 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 MLXIPLQ9NP71 852 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 MYOZ2Q9NPC6 264 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 FAM114A2Q9NRY5 505 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 TOPORSQ9NS56 1045 aaPredicted RBP9.84□□□□□ -0.83
CALD1-220ENST00000482470 AIPL1Q9NZN9 384 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 ODF2LQ9ULJ1 636 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 TRPC6Q9Y210 931 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 PCDHA10Q9Y5I2 948 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 GOLGA8SH3BPF8 625 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 INO80B-WBP1J3KQ70 363 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 CALCAP01258 141 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 IRAK1P51617 712 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 DLG4P78352 724 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 RRP1BQ14684 758 aaKnown RBP9.84□□□□□ -0.83
CALD1-220ENST00000482470 HGSNATQ68CP4 663 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 KRT39Q6A163 491 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 TMEM270Q6UE05 265 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 CEP57Q86XR8 500 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 RHOT2Q8IXI1 618 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 ZNF564Q8TBZ8 553 aaPredicted RBP9.84□□□□□ -0.83
CALD1-220ENST00000482470 HAUS1Q96CS2 278 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 CCDC77Q9BR77 488 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 INO80BQ9C086 356 aaPredicted RBP9.84□□□□□ -0.83
CALD1-220ENST00000482470 DEFB129Q9H1M3 183 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 MYH7P12883 1935 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 GAS8O95995 478 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 CNGA1P29973 690 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 CLK2P49760 499 aaKnown RBP9.84□□□□□ -0.83
CALD1-220ENST00000482470 HP1BP3Q5SSJ5 553 aaPredicted RBP9.84□□□□□ -0.83
CALD1-220ENST00000482470 MEI1Q5TIA1 1274 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 THNSL1Q8IYQ7 743 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 CPA5Q8WXQ8 436 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 TAS2R14Q9NYV8 317 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 CNOT7Q9UIV1 285 aaKnown RBP9.84□□□□□ -0.83
CALD1-220ENST00000482470 ZNF148Q9UQR1 794 aa9.84□□□□□ -0.83
CALD1-220ENST00000482470 MYH3P11055 1940 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 ASTN1O14525 1302 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 ITGB4P16144 1822 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 YDJCA8MPS7 323 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 F8VZ95 297 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 WNT10BO00744 389 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 CTNND1O60716 968 aaKnown RBP9.83□□□□□ -0.84
CALD1-220ENST00000482470 SGPL1O95470 568 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 PSAPP07602 524 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 PLS3P13797 630 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 CUL1Q13616 776 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 C1orf186Q6ZWK4 172 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 DHX38Q92620 1227 aaKnown RBP9.83□□□□□ -0.84
CALD1-220ENST00000482470 SAMD15Q9P1V8 674 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 TOGARAM1Q9Y4F4 1720 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 TGFB1I1O43294 461 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 DYNLT1P63172 113 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 KRT76Q01546 638 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 CCDC38Q502W7 563 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 TATDN1Q6P1N9 297 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 NSUN6Q8TEA1 469 aaKnown RBP9.83□□□□□ -0.84
CALD1-220ENST00000482470 PPM1EQ8WY54 764 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 RIT2Q99578 217 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 PDGFDQ9GZP0 370 aaPredicted RBP9.83□□□□□ -0.84
CALD1-220ENST00000482470 GANQ9H2C0 597 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 PPP1R9AQ9ULJ8 1098 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 CLEC11AQ9Y240 323 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 MYH6P13533 1939 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 EIF3DO15371 548 aaKnown RBP eCLIP9.83□□□□□ -0.84
CALD1-220ENST00000482470 PRLRP16471 622 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 ITGB5P18084 799 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 COMTP21964 271 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 JAK3P52333 1124 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 MUM1L1Q5H9M0 696 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 NBPF12Q5TAG4 269 aaPredicted RBP9.83□□□□□ -0.84
CALD1-220ENST00000482470 AADACL2Q6P093 401 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 LRRC31Q6UY01 552 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 ANKS4BQ8N8V4 417 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 FBXL13Q8NEE6 735 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 RBM46Q8TBY0 533 aaKnown RBP9.83□□□□□ -0.84
CALD1-220ENST00000482470 RNF25Q96BH1 459 aaPredicted RBP9.83□□□□□ -0.84
CALD1-220ENST00000482470 NLRP4Q96MN2 994 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 P2RX7Q99572 595 aaKnown RBP9.83□□□□□ -0.84
CALD1-220ENST00000482470 MSTO1Q9BUK6 570 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 POLR3FQ9H1D9 316 aaPredicted RBP9.83□□□□□ -0.84
CALD1-220ENST00000482470 KLHL11Q9NVR0 708 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 CSADQ9Y600 493 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 FAM169AQ9Y6X4 670 aa9.83□□□□□ -0.84
CALD1-220ENST00000482470 PASKQ96RG2 1323 aa9.82□□□□□ -0.84
CALD1-220ENST00000482470 CYP3A7-CYP3A51PA0A087WV96 503 aa9.82□□□□□ -0.84
CALD1-220ENST00000482470 ICAM1P05362 532 aa9.82□□□□□ -0.84
CALD1-220ENST00000482470 CYP3A7P24462 503 aa9.82□□□□□ -0.84
CALD1-220ENST00000482470 HNRNPH3P31942 346 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms