RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 SPG21Q9NZD8 308 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 PUF60Q9UHX1 559 aaKnown RBP13.16□□□□□ -0.3
HMGN1-213ENST00000482192 INPP5FQ9Y2H2 1132 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 TRANK1O15050 2925 aa13.16□□□□□ -0.3
HMGN1-213ENST00000482192 E9PMD0 336 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 B4GALT5O43286 388 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 OFD1O75665 1012 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 ARF4P18085 180 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-213ENST00000482192 CDC25AP30304 524 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 IRS1P35568 1242 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 PBX3P40426 434 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 NAMPTP43490 491 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
HMGN1-213ENST00000482192 HYAL1Q12794 435 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 AGMOQ6ZNB7 445 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 HACE1Q8IYU2 909 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 SLC39A11Q8N1S5 342 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 MICAL1Q8TDZ2 1067 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 BSNDQ8WZ55 320 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 MRPS27Q92552 414 aaKnown RBP13.15□□□□□ -0.3
HMGN1-213ENST00000482192 CPB2Q96IY4 423 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 AK8Q96MA6 479 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 UHRF1Q96T88 793 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-213ENST00000482192 MMTAG2Q9BU76 263 aaKnown RBP13.15□□□□□ -0.3
HMGN1-213ENST00000482192 TRIM6Q9C030 488 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-213ENST00000482192 NT5C3AQ9H0P0 336 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 CSRNP2Q9H175 543 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 UBN1Q9NPG3 1134 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 PRMT7Q9NVM4 692 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-213ENST00000482192 CLDND1Q9NY35 253 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 IPPQ9Y573 584 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 MYO9BQ13459 2157 aa13.15□□□□□ -0.3
HMGN1-213ENST00000482192 A0A1B0GUA9 196 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 ZC3H11AO75152 810 aaKnown RBP eCLIP13.14□□□□□ -0.31
HMGN1-213ENST00000482192 ITGA4P13612 1032 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 SYT1P21579 422 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 BCAR1P56945 870 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 ZRSR1Q15695 479 aaKnown RBP13.14□□□□□ -0.31
HMGN1-213ENST00000482192 MAPK6Q16659 721 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 FAM187BQ17R55 369 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 CTC1Q2NKJ3 1217 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 PUS10Q3MIT2 529 aaKnown RBP13.14□□□□□ -0.31
HMGN1-213ENST00000482192 HYIQ5T013 277 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 SLC27A1Q6PCB7 646 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 SMG8Q8ND04 991 aaKnown RBP13.14□□□□□ -0.31
HMGN1-213ENST00000482192 DEPTORQ8TB45 409 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 SNX21Q969T3 373 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 IFT74Q96LB3 600 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 EIF2AQ9BY44 585 aaKnown RBP13.14□□□□□ -0.31
HMGN1-213ENST00000482192 FZD8Q9H461 694 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 KANSL3Q9P2N6 904 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 UNC80Q8N2C7 3258 aa13.14□□□□□ -0.31
HMGN1-213ENST00000482192 FSD2A1L4K1 749 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 H3BQ06 376 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-213ENST00000482192 FSCN2O14926 492 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 SLC26A4O43511 780 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 NRIP1P48552 1158 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 EFNA5P52803 228 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 ERVFC1P60507 584 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 PRPF4BQ13523 1007 aaKnown RBP13.13□□□□□ -0.31
HMGN1-213ENST00000482192 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
HMGN1-213ENST00000482192 ADGRD2Q7Z7M1 963 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 TMEM169Q96HH4 297 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 DRC1Q96MC2 740 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 TCF25Q9BQ70 676 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 TIPINQ9BVW5 301 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 CCDC113Q9H0I3 377 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 IGFLR1Q9H665 355 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 NRDE2Q9H7Z3 1164 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 TLE6Q9H808 572 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 NGRNQ9NPE2 291 aaKnown RBP13.13□□□□□ -0.31
HMGN1-213ENST00000482192 ENTPD7Q9NQZ7 604 aa13.13□□□□□ -0.31
HMGN1-213ENST00000482192 PLXNA4Q9HCM2 1894 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 ARL5CA6NH57 179 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 TNFRSF10AO00220 468 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 INPPL1O15357 1258 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 NPTXRO95502 500 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 POMCP01189 267 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 GTF2F1P35269 517 aaKnown RBP eCLIP13.12□□□□□ -0.31
HMGN1-213ENST00000482192 LONP1P36776 959 aaKnown RBP13.12□□□□□ -0.31
HMGN1-213ENST00000482192 LTBRP36941 435 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 MLH1P40692 756 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 UBA7P41226 1012 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 ADAM15Q13444 863 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 TMEM132AQ24JP5 1023 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 PTCRAQ6ISU1 281 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-213ENST00000482192 RINT1Q6NUQ1 792 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 KCNK18Q7Z418 384 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 RBM23Q86U06 439 aaKnown RBP13.12□□□□□ -0.31
HMGN1-213ENST00000482192 CABP7Q86V35 215 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 EFHBQ8N7U6 833 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-213ENST00000482192 PNMA5Q96PV4 448 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 FAM193BQ96PV7 902 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-213ENST00000482192 CDCA3Q99618 268 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-213ENST00000482192 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 RUSC1Q9BVN2 902 aa13.12□□□□□ -0.31
HMGN1-213ENST00000482192 GBP3Q9H0R5 595 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms