RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 HERC2P3Q9BVR0 1158 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 INO80BQ9C086 356 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-224ENST00000481929 CNTNAP5Q8WYK1 1306 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 MIA3Q5JRA6 1907 aa16.86■□□□□ 0.29
HDAC6-224ENST00000481929 KANSL1LA0AUZ9 987 aa16.85■□□□□ 0.29
HDAC6-224ENST00000481929 hCG_1984214I3L0E3 225 aa16.85■□□□□ 0.29
HDAC6-224ENST00000481929 ZNF862O60290 1169 aa16.85■□□□□ 0.29
HDAC6-224ENST00000481929 ZNF623O75123 536 aa16.85■□□□□ 0.29
HDAC6-224ENST00000481929 DDHD2O94830 711 aa16.85■□□□□ 0.29
HDAC6-224ENST00000481929 CYP3A4P08684 503 aa16.85■□□□□ 0.29
HDAC6-224ENST00000481929 ZNF713Q8N859 430 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-224ENST00000481929 HDAC7Q8WUI4 952 aa16.85■□□□□ 0.29
HDAC6-224ENST00000481929 PHKBQ93100 1093 aa16.85■□□□□ 0.29
HDAC6-224ENST00000481929 ZNF707Q96C28 371 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-224ENST00000481929 CHAMP1Q96JM3 812 aa16.85■□□□□ 0.29
HDAC6-224ENST00000481929 EPC1Q9H2F5 836 aa16.85■□□□□ 0.29
HDAC6-224ENST00000481929 CFAP47Q6ZTR5 3102 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 A0A087WZ62 844 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 NRP1O14786 923 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 MAGEA9P43362 315 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 GLUD2P49448 558 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 DRP2Q13474 957 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 SNW1Q13573 536 aaKnown RBP16.84■□□□□ 0.29
HDAC6-224ENST00000481929 UBXN2BQ14CS0 331 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 JAKMIP3Q5VZ66 844 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 DIEXFQ68CQ4 756 aaKnown RBP16.84■□□□□ 0.29
HDAC6-224ENST00000481929 CATSPER4Q7RTX7 472 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 ST13P5Q8NFI4 369 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-224ENST00000481929 FDXACB1Q9BRP7 624 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-224ENST00000481929 NT5C3AQ9H0P0 336 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 PLEKHA4Q9H4M7 779 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 RSAD1Q9HA92 442 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 ZSCAN32Q9NX65 697 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 ZDHHC7Q9NXF8 308 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 KANSL3Q9P2N6 904 aa16.84■□□□□ 0.29
HDAC6-224ENST00000481929 BAHCC1Q9P281 2608 aa16.83■□□□□ 0.29
HDAC6-224ENST00000481929 PAPLNO95428 1278 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 SPATA31D3P0C874 917 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 CHMLP26374 656 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 DNM2P50570 870 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 GPC5P78333 572 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 PRKCQQ04759 706 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 MLF2Q15773 248 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-224ENST00000481929 SYNE3Q6ZMZ3 975 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 AGMOQ6ZNB7 445 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 SPATA31D4Q6ZUB0 917 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 ZNF410Q86VK4 478 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 ZBTB44Q8NCP5 570 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 CRYGNQ8WXF5 182 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 MAP4K1Q92918 833 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 OSBPL6Q9BZF3 934 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 RXFP1Q9HBX9 757 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 DISC1Q9NRI5 854 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 RBM28Q9NW13 759 aaKnown RBP16.83■□□□□ 0.28
HDAC6-224ENST00000481929 BARHL2Q9NY43 387 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 CNTNAP2Q9UHC6 1331 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 GMEB2Q9UKD1 530 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 PRG3Q9Y2Y8 225 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-224ENST00000481929 PCDHB2Q9Y5E7 798 aa16.83■□□□□ 0.28
HDAC6-224ENST00000481929 RBM8AQ9Y5S9 174 aaKnown RBP16.83■□□□□ 0.28
HDAC6-224ENST00000481929 ZFP37Q9Y6Q3 630 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-224ENST00000481929 PATJQ8NI35 1801 aa16.82■□□□□ 0.28
HDAC6-224ENST00000481929 TBC1D4O60343 1298 aa16.82■□□□□ 0.28
HDAC6-224ENST00000481929 GSPT1P15170 499 aaKnown RBP16.82■□□□□ 0.28
HDAC6-224ENST00000481929 PRR16Q569H4 304 aa16.82■□□□□ 0.28
HDAC6-224ENST00000481929 TAS1R1Q7RTX1 841 aa16.82■□□□□ 0.28
HDAC6-224ENST00000481929 DDX23Q9BUQ8 820 aaKnown RBP16.82■□□□□ 0.28
HDAC6-224ENST00000481929 PRKD2Q9BZL6 878 aa16.82■□□□□ 0.28
HDAC6-224ENST00000481929 ATRXP46100 2492 aa16.82■□□□□ 0.28
HDAC6-224ENST00000481929 FAM170BA6NMN3 283 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 SGSM2O43147 1006 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 LILRB5O75023 590 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 C1RP00736 705 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 POMCP01189 267 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 OR1G1P47890 313 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 AFF1P51825 1210 aaKnown RBP16.81■□□□□ 0.28
HDAC6-224ENST00000481929 AAMPQ13685 434 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 TARBP2Q15633 366 aaKnown RBP16.81■□□□□ 0.28
HDAC6-224ENST00000481929 UGCGQ16739 394 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 MTERF2Q49AM1 385 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 TTC22Q5TAA0 569 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 PALB2Q86YC2 1186 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 FGF14Q92915 247 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 RPP25Q9BUL9 199 aaKnown RBP16.81■□□□□ 0.28
HDAC6-224ENST00000481929 LRRC2Q9BYS8 371 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 MARCH5Q9NX47 278 aa16.81■□□□□ 0.28
HDAC6-224ENST00000481929 V9GY48 417 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-224ENST00000481929 WDR81Q562E7 1941 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 GAS2O43903 313 aaKnown RBP16.8■□□□□ 0.28
HDAC6-224ENST00000481929 IGHDP01880 384 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 TGM1P22735 817 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 FSHRP23945 695 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 DSG1Q02413 1049 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 SLC44A4Q53GD3 710 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 PPM1JQ5JR12 505 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 PARM1Q6UWI2 310 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 RSPO2Q6UXX9 243 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-224ENST00000481929 MTSS1LQ765P7 747 aa16.8■□□□□ 0.28
HDAC6-224ENST00000481929 MRPL10Q7Z7H8 261 aaKnown RBP16.8■□□□□ 0.28
HDAC6-224ENST00000481929 SGMS1Q86VZ5 419 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms