RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CPB2Q96IY4 423 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 RPGRIP1Q96KN7 1286 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 ANKEF1Q9NU02 776 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 CDH22Q9UJ99 828 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 HCN4Q9Y3Q4 1203 aa20.67■□□□□ 0.9
CLK1-211ENST00000481641 LOC730098B7Z3J9 87 aa20.66■□□□□ 0.9
CLK1-211ENST00000481641 CLASP2O75122 1294 aaKnown RBP20.66■□□□□ 0.9
CLK1-211ENST00000481641 DDHD2O94830 711 aa20.66■□□□□ 0.9
CLK1-211ENST00000481641 RARRES1P49788 294 aa20.66■□□□□ 0.9
CLK1-211ENST00000481641 PTENP60484 403 aa20.66■□□□□ 0.9
CLK1-211ENST00000481641 CAPSQ13938 189 aa20.66■□□□□ 0.9
CLK1-211ENST00000481641 SAFBQ15424 915 aaKnown RBP eCLIP20.66■□□□□ 0.9
CLK1-211ENST00000481641 ZNF174Q15697 407 aa20.66■□□□□ 0.9
CLK1-211ENST00000481641 SMG8Q8ND04 991 aaKnown RBP20.66■□□□□ 0.9
CLK1-211ENST00000481641 IGSF21Q96ID5 467 aa20.66■□□□□ 0.9
CLK1-211ENST00000481641 C8orf76Q96K31 380 aa20.66■□□□□ 0.9
CLK1-211ENST00000481641 KIF2CQ99661 725 aa20.66■□□□□ 0.9
CLK1-211ENST00000481641 PHF7Q9BWX1 381 aaPredicted RBP20.66■□□□□ 0.9
CLK1-211ENST00000481641 EIF2AQ9BY44 585 aaKnown RBP20.66■□□□□ 0.9
CLK1-211ENST00000481641 ZBP1Q9H171 429 aa20.66■□□□□ 0.9
CLK1-211ENST00000481641 RSAD1Q9HA92 442 aa20.66■□□□□ 0.9
CLK1-211ENST00000481641 FSD2A1L4K1 749 aa20.65■□□□□ 0.9
CLK1-211ENST00000481641 INO80B-WBP1J3KQ70 363 aa20.65■□□□□ 0.9
CLK1-211ENST00000481641 TSPAN1O60635 241 aa20.65■□□□□ 0.9
CLK1-211ENST00000481641 ERLIN2O94905 339 aa20.65■□□□□ 0.9
CLK1-211ENST00000481641 SPATA31C1P0DKV0 1188 aa20.65■□□□□ 0.9
CLK1-211ENST00000481641 ARL2P36404 184 aa20.65■□□□□ 0.9
CLK1-211ENST00000481641 MXD4Q14582 209 aaPredicted RBP20.65■□□□□ 0.9
CLK1-211ENST00000481641 HERC4Q5GLZ8 1057 aaPredicted RBP20.65■□□□□ 0.9
CLK1-211ENST00000481641 MAEAQ7L5Y9 396 aa20.65■□□□□ 0.9
CLK1-211ENST00000481641 CCDC43Q96MW1 224 aaKnown RBP20.65■□□□□ 0.9
CLK1-211ENST00000481641 VN1R3Q9BXE9 311 aa20.65■□□□□ 0.9
CLK1-211ENST00000481641 RNF39Q9H2S5 420 aa20.65■□□□□ 0.9
CLK1-211ENST00000481641 HCFC2Q9Y5Z7 792 aa20.65■□□□□ 0.9
CLK1-211ENST00000481641 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.64■□□□□ 0.89
CLK1-211ENST00000481641 USO1O60763 962 aaKnown RBP20.64■□□□□ 0.89
CLK1-211ENST00000481641 MED24O75448 989 aa20.64■□□□□ 0.89
CLK1-211ENST00000481641 DGAT1O75907 488 aa20.64■□□□□ 0.89
CLK1-211ENST00000481641 POMCP01189 267 aa20.64■□□□□ 0.89
CLK1-211ENST00000481641 SRGAP2BP0DMP2 458 aa20.64■□□□□ 0.89
CLK1-211ENST00000481641 GLRA2P23416 452 aa20.64■□□□□ 0.89
CLK1-211ENST00000481641 SP100P23497 879 aaPredicted RBP20.64■□□□□ 0.89
CLK1-211ENST00000481641 PLA2G5P39877 138 aa20.64■□□□□ 0.89
CLK1-211ENST00000481641 DDX53Q86TM3 631 aaKnown RBP20.64■□□□□ 0.89
CLK1-211ENST00000481641 URGCPQ8TCY9 931 aa20.64■□□□□ 0.89
CLK1-211ENST00000481641 FAM122AQ96E09 287 aa20.64■□□□□ 0.89
CLK1-211ENST00000481641 POLR3FQ9H1D9 316 aaPredicted RBP20.64■□□□□ 0.89
CLK1-211ENST00000481641 GPRC5CQ9NQ84 441 aa20.64■□□□□ 0.89
CLK1-211ENST00000481641 HES2Q9Y543 173 aa20.64■□□□□ 0.89
CLK1-211ENST00000481641 NCLP19338 710 aaKnown RBP20.63■□□□□ 0.89
CLK1-211ENST00000481641 MBTD1Q05BQ5 628 aa20.63■□□□□ 0.89
CLK1-211ENST00000481641 TFDP1Q14186 410 aa20.63■□□□□ 0.89
CLK1-211ENST00000481641 CBX2Q14781 532 aaPredicted RBP20.63■□□□□ 0.89
CLK1-211ENST00000481641 AMHR2Q16671 573 aa20.63■□□□□ 0.89
CLK1-211ENST00000481641 C8orf34Q49A92 452 aa20.63■□□□□ 0.89
CLK1-211ENST00000481641 KANK3Q6NY19 840 aa20.63■□□□□ 0.89
CLK1-211ENST00000481641 CDR2LQ86X02 465 aaPredicted RBP20.63■□□□□ 0.89
CLK1-211ENST00000481641 CATSPER3Q86XQ3 398 aa20.63■□□□□ 0.89
CLK1-211ENST00000481641 RSPH1Q8WYR4 309 aa20.63■□□□□ 0.89
CLK1-211ENST00000481641 CASP10Q92851 521 aa20.63■□□□□ 0.89
CLK1-211ENST00000481641 LLPHQ9BRT6 129 aaKnown RBP20.63■□□□□ 0.89
CLK1-211ENST00000481641 IPPQ9Y573 584 aa20.63■□□□□ 0.89
CLK1-211ENST00000481641 TECTAO75443 2155 aa20.62■□□□□ 0.89
CLK1-211ENST00000481641 CNTNAP2Q9UHC6 1331 aa20.62■□□□□ 0.89
CLK1-211ENST00000481641 B4GALT5O43286 388 aa20.62■□□□□ 0.89
CLK1-211ENST00000481641 SSBP05455 408 aaKnown RBP eCLIP20.62■□□□□ 0.89
CLK1-211ENST00000481641 CENPBP07199 599 aaPredicted RBP20.62■□□□□ 0.89
CLK1-211ENST00000481641 CTSAP10619 480 aa20.62■□□□□ 0.89
CLK1-211ENST00000481641 ITGA4P13612 1032 aa20.62■□□□□ 0.89
CLK1-211ENST00000481641 IFNLR1Q8IU57 520 aaPredicted RBP20.62■□□□□ 0.89
CLK1-211ENST00000481641 C12orf76Q8N812 135 aaPredicted RBP20.62■□□□□ 0.89
CLK1-211ENST00000481641 FAM193BQ96PV7 902 aaPredicted RBP20.62■□□□□ 0.89
CLK1-211ENST00000481641 APOL6Q9BWW8 343 aa20.62■□□□□ 0.89
CLK1-211ENST00000481641 MIOSQ9NXC5 875 aa20.62■□□□□ 0.89
CLK1-211ENST00000481641 WEE2P0C1S8 567 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 OR52Z1P0C646 297 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 EPCAMP16422 314 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 HOXB8P17481 243 aaPredicted RBP20.61■□□□□ 0.89
CLK1-211ENST00000481641 ARF4P18085 180 aaPredicted RBP20.61■□□□□ 0.89
CLK1-211ENST00000481641 AXLP30530 894 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 POU5F1BQ06416 359 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 NBR1Q14596 966 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 BMS1Q14692 1282 aaKnown RBP20.61■□□□□ 0.89
CLK1-211ENST00000481641 NOTUMQ6P988 496 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 POTEGQ6S5H5 508 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 HFE2Q6ZVN8 426 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 FBXO18Q8NFZ0 1043 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 FEZF2Q8TBJ5 459 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 ZSCAN31Q96LW9 406 aaPredicted RBP20.61■□□□□ 0.89
CLK1-211ENST00000481641 GAD1Q99259 594 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 CSRNP2Q9H175 543 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 FOXP1Q9H334 677 aaPredicted RBP20.61■□□□□ 0.89
CLK1-211ENST00000481641 FAN1Q9Y2M0 1017 aa20.61■□□□□ 0.89
CLK1-211ENST00000481641 NRP1O14786 923 aa20.6■□□□□ 0.89
CLK1-211ENST00000481641 ALDH2P05091 517 aa20.6■□□□□ 0.89
CLK1-211ENST00000481641 XRCC6P12956 609 aaKnown RBP eCLIP20.6■□□□□ 0.89
CLK1-211ENST00000481641 MLH1P40692 756 aa20.6■□□□□ 0.89
CLK1-211ENST00000481641 TTC38Q5R3I4 469 aa20.6■□□□□ 0.89
CLK1-211ENST00000481641 FAM184AQ8NB25 1140 aa20.6■□□□□ 0.89
CLK1-211ENST00000481641 TMEM87AQ8NBN3 555 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms