RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 ETV4P43268 484 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 SLC16A1P53985 500 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 NRG3P56975 720 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 SEPT2Q15019 361 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 TRIM68Q6AZZ1 485 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 CNKSR3Q6P9H4 555 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 SLC4A10Q6U841 1118 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 LMBR1LQ6UX01 489 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 SYDE1Q6ZW31 735 aaPredicted RBP6.71□□□□□ -1.34
UPF3A-207ENST00000481131 LARP4Q71RC2 724 aaKnown RBP eCLIP6.71□□□□□ -1.34
UPF3A-207ENST00000481131 GRAMD1CQ8IYS0 662 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 ZBTB34Q8NCN2 500 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 PIK3C3Q8NEB9 887 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 HOXB13Q92826 284 aaPredicted RBP6.71□□□□□ -1.34
UPF3A-207ENST00000481131 YTHDC1Q96MU7 727 aaKnown RBP6.71□□□□□ -1.34
UPF3A-207ENST00000481131 PWWP2AQ96N64 755 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 ACO2Q99798 780 aaKnown RBP6.71□□□□□ -1.34
UPF3A-207ENST00000481131 SPATA25Q9BR10 227 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 ADI1Q9BV57 179 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 INTUQ9ULD6 942 aa6.71□□□□□ -1.34
UPF3A-207ENST00000481131 HMGCRP04035 888 aa6.7□□□□□ -1.34
UPF3A-207ENST00000481131 C1QTNF9P0C862 333 aa6.7□□□□□ -1.34
UPF3A-207ENST00000481131 GAAP10253 952 aa6.7□□□□□ -1.34
UPF3A-207ENST00000481131 CTSSP25774 331 aa6.7□□□□□ -1.34
UPF3A-207ENST00000481131 MGAT2Q10469 447 aa6.7□□□□□ -1.34
UPF3A-207ENST00000481131 HLTFQ14527 1009 aaKnown RBP eCLIP6.7□□□□□ -1.34
UPF3A-207ENST00000481131 ABHD15Q6UXT9 468 aa6.7□□□□□ -1.34
UPF3A-207ENST00000481131 PPP1R35Q8TAP8 253 aa6.7□□□□□ -1.34
UPF3A-207ENST00000481131 RIN2Q8WYP3 895 aaPredicted RBP6.7□□□□□ -1.34
UPF3A-207ENST00000481131 MVB12AQ96EY5 273 aa6.7□□□□□ -1.34
UPF3A-207ENST00000481131 MAP3K14Q99558 947 aa6.7□□□□□ -1.34
UPF3A-207ENST00000481131 PRDM11Q9NQV5 511 aa6.7□□□□□ -1.34
UPF3A-207ENST00000481131 SAP30BPQ9UHR5 308 aaKnown RBP6.7□□□□□ -1.34
UPF3A-207ENST00000481131 KRT18P05783 430 aaKnown RBP6.69□□□□□ -1.34
UPF3A-207ENST00000481131 IL10RAQ13651 578 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 UBE3CQ15386 1083 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 SPOCD1Q6ZMY3 1216 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 Q6ZUG5 572 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 OVCH2Q7RTZ1 564 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 ADGRG2Q8IZP9 1017 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 MSL3Q8N5Y2 521 aaKnown RBP6.69□□□□□ -1.34
UPF3A-207ENST00000481131 MARCH10Q8NA82 808 aaPredicted RBP6.69□□□□□ -1.34
UPF3A-207ENST00000481131 GPR156Q8NFN8 814 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 KAT5Q92993 513 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 KATNBL1Q9H079 304 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 L2HGDHQ9H9P8 463 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 CHST12Q9NRB3 414 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 C1orf112Q9NSG2 853 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 RBM12Q9NTZ6 932 aaKnown RBP6.69□□□□□ -1.34
UPF3A-207ENST00000481131 RCAN3Q9UKA8 241 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 KCTD3Q9Y597 815 aa6.69□□□□□ -1.34
UPF3A-207ENST00000481131 A0A1B0GTL3 188 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 SH3D21A4FU49 640 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 FFAR3O14843 346 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 CTNND1O60716 968 aaKnown RBP6.68□□□□□ -1.34
UPF3A-207ENST00000481131 FSBPO95073 299 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 MYL1P05976 194 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 LTA4HP09960 611 aaKnown RBP6.68□□□□□ -1.34
UPF3A-207ENST00000481131 USP14P54578 494 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 MEF2AQ02078 507 aaPredicted RBP6.68□□□□□ -1.34
UPF3A-207ENST00000481131 ADAM15Q13444 863 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 PCOLCEQ15113 449 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 MAN2A1Q16706 1144 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 ZNF827Q17R98 1081 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 KLHDC10Q6PID8 442 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 KSR2Q6VAB6 950 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 ATG14Q6ZNE5 492 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 Q6ZVL8 140 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 CLEC14AQ86T13 490 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 C1QL4Q86Z23 238 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 IFNL2Q8IZJ0 200 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 UNC5BQ8IZJ1 945 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 KIAA1683Q9H0B3 1180 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 CD320Q9NPF0 282 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 PTPN22Q9Y2R2 807 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 MROH2BQ7Z745 1585 aa6.68□□□□□ -1.34
UPF3A-207ENST00000481131 FRMPD2Q68DX3 1309 aaPredicted RBP6.68□□□□□ -1.34
UPF3A-207ENST00000481131 BAZ1AQ9NRL2 1556 aaPredicted RBP6.67□□□□□ -1.34
UPF3A-207ENST00000481131 C2orf78A6NCI8 922 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 ALDH2P05091 517 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 ZNF888P0CJ79 500 aaPredicted RBP6.67□□□□□ -1.34
UPF3A-207ENST00000481131 CSF2RBP32927 897 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 SLC6A9P48067 706 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 CAP1Q01518 475 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 DSC2Q02487 901 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 NOMO1Q15155 1222 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 PGS1Q32NB8 556 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 FBLN7Q53RD9 439 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 CHST15Q7LFX5 561 aaPredicted RBP6.67□□□□□ -1.34
UPF3A-207ENST00000481131 HDAC10Q969S8 669 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 DACT3Q96B18 629 aaPredicted RBP6.67□□□□□ -1.34
UPF3A-207ENST00000481131 C1GALT1C1Q96EU7 318 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 SLC39A13Q96H72 371 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 AJUBAQ96IF1 538 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 PAWRQ96IZ0 340 aaKnown RBP6.67□□□□□ -1.34
UPF3A-207ENST00000481131 SLC38A3Q99624 504 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 NTMQ9P121 344 aa6.67□□□□□ -1.34
UPF3A-207ENST00000481131 CNOT6Q9ULM6 557 aaKnown RBP6.67□□□□□ -1.34
UPF3A-207ENST00000481131 SMG5Q9UPR3 1016 aaKnown RBP6.67□□□□□ -1.34
UPF3A-207ENST00000481131 SIK3Q9Y2K2 1263 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms