RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 HOXB8P17481 243 aaPredicted RBP16.99■□□□□ 0.31
LIMS3-203ENST00000480744 ATP2B1P20020 1258 aa16.99■□□□□ 0.31
LIMS3-203ENST00000480744 TXKP42681 527 aa16.99■□□□□ 0.31
LIMS3-203ENST00000480744 SLC11A1P49279 550 aa16.99■□□□□ 0.31
LIMS3-203ENST00000480744 TPRNQ4KMQ1 711 aa16.99■□□□□ 0.31
LIMS3-203ENST00000480744 BCL7CQ8WUZ0 217 aaPredicted RBP16.99■□□□□ 0.31
LIMS3-203ENST00000480744 IGSF21Q96ID5 467 aa16.99■□□□□ 0.31
LIMS3-203ENST00000480744 FAM193BQ96PV7 902 aaPredicted RBP16.99■□□□□ 0.31
LIMS3-203ENST00000480744 ZBP1Q9H171 429 aa16.99■□□□□ 0.31
LIMS3-203ENST00000480744 RSAD1Q9HA92 442 aa16.99■□□□□ 0.31
LIMS3-203ENST00000480744 CDH22Q9UJ99 828 aa16.99■□□□□ 0.31
LIMS3-203ENST00000480744 CARNS1A5YM72 827 aa16.98■□□□□ 0.31
LIMS3-203ENST00000480744 WNT7AO00755 349 aa16.98■□□□□ 0.31
LIMS3-203ENST00000480744 EIF5BO60841 1220 aaKnown RBP16.98■□□□□ 0.31
LIMS3-203ENST00000480744 HOXA11P31270 313 aaPredicted RBP16.98■□□□□ 0.31
LIMS3-203ENST00000480744 GUCY1B3Q02153 619 aa16.98■□□□□ 0.31
LIMS3-203ENST00000480744 TFDP1Q14186 410 aa16.98■□□□□ 0.31
LIMS3-203ENST00000480744 UBXN11Q5T124 520 aa16.98■□□□□ 0.31
LIMS3-203ENST00000480744 CES5AQ6NT32 575 aa16.98■□□□□ 0.31
LIMS3-203ENST00000480744 AGMOQ6ZNB7 445 aa16.98■□□□□ 0.31
LIMS3-203ENST00000480744 DDX53Q86TM3 631 aaKnown RBP16.98■□□□□ 0.31
LIMS3-203ENST00000480744 ZNF280BQ86YH2 543 aa16.98■□□□□ 0.31
LIMS3-203ENST00000480744 XPNPEP1Q9NQW7 623 aa16.98■□□□□ 0.31
LIMS3-203ENST00000480744 TSHZ2Q9NRE2 1034 aa16.98■□□□□ 0.31
LIMS3-203ENST00000480744 ZNF318Q5VUA4 2279 aa16.98■□□□□ 0.31
LIMS3-203ENST00000480744 CNTNAP2Q9UHC6 1331 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 MYO10Q9HD67 2058 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 A0A087WWV3 80 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 INO80B-WBP1J3KQ70 363 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 B4GALT3O60512 393 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 POMCP01189 267 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 SSBP05455 408 aaKnown RBP eCLIP16.97■□□□□ 0.31
LIMS3-203ENST00000480744 ITGA4P13612 1032 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 AFF1P51825 1210 aaKnown RBP16.97■□□□□ 0.31
LIMS3-203ENST00000480744 ZXDAP98168 799 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 MXD4Q14582 209 aaPredicted RBP16.97■□□□□ 0.31
LIMS3-203ENST00000480744 TRIM67Q6ZTA4 783 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 MRPL10Q7Z7H8 261 aaKnown RBP16.97■□□□□ 0.31
LIMS3-203ENST00000480744 ZBTB33Q86T24 672 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 CPB2Q96IY4 423 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 MFSD14AQ96MC6 490 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 HSD17B14Q9BPX1 270 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 ANKEF1Q9NU02 776 aa16.97■□□□□ 0.31
LIMS3-203ENST00000480744 TMEM221A6NGB7 291 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 POTEMA6NI47 508 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 M0R296 226 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 TSPAN1O60635 241 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 DGAT1O75907 488 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 DDHD2O94830 711 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 LYPLA2O95372 231 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 SEC24BO95487 1268 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 CTSAP10619 480 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 NCLP19338 710 aaKnown RBP16.96■□□□□ 0.31
LIMS3-203ENST00000480744 MCM7P33993 719 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 PTENP60484 403 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 NCBP1Q09161 790 aaKnown RBP16.96■□□□□ 0.31
LIMS3-203ENST00000480744 ST3GAL1Q11201 340 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 SAFBQ15424 915 aaKnown RBP eCLIP16.96■□□□□ 0.31
LIMS3-203ENST00000480744 RARS2Q5T160 578 aaKnown RBP16.96■□□□□ 0.31
LIMS3-203ENST00000480744 C12orf76Q8N812 135 aaPredicted RBP16.96■□□□□ 0.31
LIMS3-203ENST00000480744 ASAP3Q8TDY4 903 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 PIGOQ8TEQ8 1089 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 EIF2AQ9BY44 585 aaKnown RBP16.96■□□□□ 0.31
LIMS3-203ENST00000480744 KANSL3Q9P2N6 904 aa16.96■□□□□ 0.31
LIMS3-203ENST00000480744 SPDYE4A6NLX3 237 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 USO1O60763 962 aaKnown RBP16.95■□□□□ 0.3
LIMS3-203ENST00000480744 WEE2P0C1S8 567 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 EPCAMP16422 314 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 ITIH3Q06033 890 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 CAPSQ13938 189 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 GIT2Q14161 759 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 KANK3Q6NY19 840 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 NOTUMQ6P988 496 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 CCDC83Q8IWF9 413 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 SMG8Q8ND04 991 aaKnown RBP16.95■□□□□ 0.3
LIMS3-203ENST00000480744 CNNM3Q8NE01 707 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 PBXIP1Q96AQ6 731 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 APOL6Q9BWW8 343 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 VN1R3Q9BXE9 311 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 POLR3FQ9H1D9 316 aaPredicted RBP16.95■□□□□ 0.3
LIMS3-203ENST00000480744 TMEM60Q9H2L4 133 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 ADAM7Q9H2U9 754 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 POMKQ9H5K3 350 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 DZANK1Q9NVP4 752 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 FAN1Q9Y2M0 1017 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 IPPQ9Y573 584 aa16.95■□□□□ 0.3
LIMS3-203ENST00000480744 ALDH2P05091 517 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 AXLP30530 894 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
LIMS3-203ENST00000480744 RARRES1P49788 294 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 MBTD1Q05BQ5 628 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 PTPN14Q15678 1187 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 MAEAQ7L5Y9 396 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 CCDC51Q96ER9 411 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 C8orf76Q96K31 380 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 RIPOR3Q96MK2 946 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 NECTIN4Q96NY8 510 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 MTMR9Q96QG7 549 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 TMEM175Q9BSA9 504 aa16.94■□□□□ 0.3
LIMS3-203ENST00000480744 TRIM6Q9C030 488 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms