RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CRIPAKQ8N1N5 446 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 TMEM161BQ8NDZ6 487 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 ENGASEQ8NFI3 743 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 STAMQ92783 540 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 FIZ1Q96SL8 496 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 ST6GALNAC4Q9H4F1 302 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 OLFML3Q9NRN5 406 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 COL4A6Q14031 1691 aa21.75■■□□□ 1.07
LIME1-205ENST00000480139 SLC16A4O15374 487 aa21.74■■□□□ 1.07
LIME1-205ENST00000480139 PRKCBP05771 671 aa21.74■■□□□ 1.07
LIME1-205ENST00000480139 SNW1Q13573 536 aaKnown RBP21.74■■□□□ 1.07
LIME1-205ENST00000480139 NOTUMQ6P988 496 aa21.74■■□□□ 1.07
LIME1-205ENST00000480139 KRBA2Q6ZNG9 492 aa21.74■■□□□ 1.07
LIME1-205ENST00000480139 NPAS4Q8IUM7 802 aa21.74■■□□□ 1.07
LIME1-205ENST00000480139 FAM178BQ8IXR5 827 aa21.74■■□□□ 1.07
LIME1-205ENST00000480139 CCDC65Q8IXS2 484 aa21.74■■□□□ 1.07
LIME1-205ENST00000480139 MYOCDQ8IZQ8 938 aa21.74■■□□□ 1.07
LIME1-205ENST00000480139 PAGE5Q96GU1 130 aa21.74■■□□□ 1.07
LIME1-205ENST00000480139 ZHX3Q9H4I2 956 aa21.74■■□□□ 1.07
LIME1-205ENST00000480139 ELAC1Q9H777 363 aaKnown RBP21.74■■□□□ 1.07
LIME1-205ENST00000480139 A0A0U1RQF3 1178 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 GJB5O95377 273 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 SKIP12755 728 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 ARF4P18085 180 aaPredicted RBP21.73■■□□□ 1.07
LIME1-205ENST00000480139 RAB27AP51159 221 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 UBE2HP62256 183 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 PRPF4BQ13523 1007 aaKnown RBP21.73■■□□□ 1.07
LIME1-205ENST00000480139 HABP4Q5JVS0 413 aaKnown RBP21.73■■□□□ 1.07
LIME1-205ENST00000480139 TWF2Q6IBS0 349 aaKnown RBP21.73■■□□□ 1.07
LIME1-205ENST00000480139 KANK3Q6NY19 840 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 HAUS6Q7Z4H7 955 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 SFR1Q86XK3 245 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 CNNM3Q8NE01 707 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 CCDC34Q96HJ3 373 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 GBP4Q96PP9 640 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 PANK4Q9NVE7 773 aa21.73■■□□□ 1.07
LIME1-205ENST00000480139 A0A1B0GUA9 196 aa21.72■■□□□ 1.07
LIME1-205ENST00000480139 B4GALT5O43286 388 aa21.72■■□□□ 1.07
LIME1-205ENST00000480139 GADD45BO75293 160 aaPredicted RBP21.72■■□□□ 1.07
LIME1-205ENST00000480139 STAG3L1P0CL83 205 aa21.72■■□□□ 1.07
LIME1-205ENST00000480139 IDEP14735 1019 aa21.72■■□□□ 1.07
LIME1-205ENST00000480139 AFMP43652 599 aa21.72■■□□□ 1.07
LIME1-205ENST00000480139 ASIC1P78348 528 aa21.72■■□□□ 1.07
LIME1-205ENST00000480139 TPRNQ4KMQ1 711 aa21.72■■□□□ 1.07
LIME1-205ENST00000480139 FAM109BQ6ICB4 259 aaPredicted RBP21.72■■□□□ 1.07
LIME1-205ENST00000480139 UNC13DQ70J99 1090 aa21.72■■□□□ 1.07
LIME1-205ENST00000480139 TAS1R3Q7RTX0 852 aa21.72■■□□□ 1.07
LIME1-205ENST00000480139 TIGD1Q96MW7 591 aa21.72■■□□□ 1.07
LIME1-205ENST00000480139 TMEM161AQ9NX61 479 aa21.72■■□□□ 1.07
LIME1-205ENST00000480139 PVALEFA0A1B0GWK0 134 aa21.71■■□□□ 1.07
LIME1-205ENST00000480139 K7ENM7 598 aa21.71■■□□□ 1.07
LIME1-205ENST00000480139 GTPBP6O43824 516 aaPredicted RBP21.71■■□□□ 1.07
LIME1-205ENST00000480139 ZNF623O75123 536 aa21.71■■□□□ 1.07
LIME1-205ENST00000480139 HTRA4P83105 476 aaPredicted RBP21.71■■□□□ 1.07
LIME1-205ENST00000480139 GTF2BQ00403 316 aa21.71■■□□□ 1.07
LIME1-205ENST00000480139 STRN3Q13033 797 aa21.71■■□□□ 1.07
LIME1-205ENST00000480139 CUL4BQ13620 913 aa21.71■■□□□ 1.07
LIME1-205ENST00000480139 RAB30Q15771 203 aa21.71■■□□□ 1.07
LIME1-205ENST00000480139 HERC4Q5GLZ8 1057 aaPredicted RBP21.71■■□□□ 1.07
LIME1-205ENST00000480139 SLC27A1Q6PCB7 646 aa21.71■■□□□ 1.07
LIME1-205ENST00000480139 HVCN1Q96D96 273 aa21.71■■□□□ 1.07
LIME1-205ENST00000480139 MRPL4Q9BYD3 311 aaKnown RBP21.71■■□□□ 1.07
LIME1-205ENST00000480139 FAM105AQ9NUU6 356 aa21.71■■□□□ 1.07
LIME1-205ENST00000480139 PCDHA11Q9Y5I1 949 aa21.71■■□□□ 1.07
LIME1-205ENST00000480139 N4BP3O15049 544 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 EOMESO95936 686 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 EDN1P05305 212 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 EHHADHQ08426 723 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 COASYQ13057 564 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 ALCAMQ13740 583 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 UBXN11Q5T124 520 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 ZNF720Q7Z2F6 126 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 ZNF598Q86UK7 904 aaKnown RBP21.7■■□□□ 1.06
LIME1-205ENST00000480139 ECHDC2Q86YB7 292 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 GRAMD1CQ8IYS0 662 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 CPB2Q96IY4 423 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 STRA6Q9BX79 667 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 BLZF1Q9H2G9 400 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 PCDHB7Q9Y5E2 793 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 LAMA3Q16787 3333 aa21.7■■□□□ 1.06
LIME1-205ENST00000480139 TTLL13PA6NNM8 815 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 GRXCR1A8MXD5 290 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 PRPF40AO75400 957 aaKnown RBP21.69■■□□□ 1.06
LIME1-205ENST00000480139 PPP1R37O75864 691 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 NT5DC1Q5TFE4 455 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 ATF7IP2Q5U623 682 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 ZPBP2Q6X784 338 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 TMCO2Q7Z6W1 182 aaPredicted RBP21.69■■□□□ 1.06
LIME1-205ENST00000480139 ELOA2Q8IYF1 753 aaPredicted RBP21.69■■□□□ 1.06
LIME1-205ENST00000480139 RSPH1Q8WYR4 309 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 RAD9AQ99638 391 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 ZBED2Q9BTP6 218 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 PBX4Q9BYU1 374 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 PDZD7Q9H5P4 517 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 MRPL44Q9H9J2 332 aaKnown RBP21.69■■□□□ 1.06
LIME1-205ENST00000480139 RC3H2Q9HBD1 1191 aaKnown RBP21.69■■□□□ 1.06
LIME1-205ENST00000480139 LRFN2Q9ULH4 789 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 TBX20Q9UMR3 447 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 TNFSF13BQ9Y275 285 aa21.69■■□□□ 1.06
LIME1-205ENST00000480139 INSL6Q9Y581 213 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms