RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 CLDN23Q96B33 292 aa12.65□□□□□ -0.38
CCDC18-208ENST00000479653 FAM193BQ96PV7 902 aaPredicted RBP12.65□□□□□ -0.38
CCDC18-208ENST00000479653 PRMT8Q9NR22 394 aaPredicted RBP12.65□□□□□ -0.38
CCDC18-208ENST00000479653 FAM217BQ9NTX9 383 aaPredicted RBP12.65□□□□□ -0.38
CCDC18-208ENST00000479653 ZFP37Q9Y6Q3 630 aaPredicted RBP12.65□□□□□ -0.38
CCDC18-208ENST00000479653 CNOT1A5YKK6 2376 aaKnown RBP12.64□□□□□ -0.39
CCDC18-208ENST00000479653 MEIS3P2A8K0S8 358 aa12.64□□□□□ -0.39
CCDC18-208ENST00000479653 MAGEB2O15479 319 aa12.64□□□□□ -0.39
CCDC18-208ENST00000479653 SOD2P04179 222 aa12.64□□□□□ -0.39
CCDC18-208ENST00000479653 RPS9P46781 194 aaKnown RBP12.64□□□□□ -0.39
CCDC18-208ENST00000479653 SIM2Q14190 667 aaPredicted RBP12.64□□□□□ -0.39
CCDC18-208ENST00000479653 PPP2R5DQ14738 602 aa12.64□□□□□ -0.39
CCDC18-208ENST00000479653 UNQ6494/PRO21346Q6UXR6 183 aa12.64□□□□□ -0.39
CCDC18-208ENST00000479653 ZNF852Q6ZMS4 543 aa12.64□□□□□ -0.39
CCDC18-208ENST00000479653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.64□□□□□ -0.39
CCDC18-208ENST00000479653 URGCPQ8TCY9 931 aa12.64□□□□□ -0.39
CCDC18-208ENST00000479653 PRKD2Q9BZL6 878 aa12.64□□□□□ -0.39
CCDC18-208ENST00000479653 PLEKHA4Q9H4M7 779 aa12.64□□□□□ -0.39
CCDC18-208ENST00000479653 CHST12Q9NRB3 414 aa12.64□□□□□ -0.39
CCDC18-208ENST00000479653 CEP131Q9UPN4 1083 aa12.64□□□□□ -0.39
CCDC18-208ENST00000479653 BAZ2BQ9UIF8 2168 aaKnown RBP12.64□□□□□ -0.39
CCDC18-208ENST00000479653 NRP1O14786 923 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 B4GALT3O60512 393 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 DDHD2O94830 711 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 SKIP12755 728 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 GPC3P51654 580 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 AASDHQ4L235 1098 aaPredicted RBP12.63□□□□□ -0.39
CCDC18-208ENST00000479653 CEP55Q53EZ4 464 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 MTSS1LQ765P7 747 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 GRASPQ7Z6J2 395 aaPredicted RBP12.63□□□□□ -0.39
CCDC18-208ENST00000479653 GLYCTKQ8IVS8 523 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 ZNF710Q8N1W2 664 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 HDAC7Q8WUI4 952 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 SPZ1Q9BXG8 430 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 RWDD1Q9H446 243 aaPredicted RBP12.63□□□□□ -0.39
CCDC18-208ENST00000479653 ZDHHC7Q9NXF8 308 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 CDH7Q9ULB5 785 aa12.63□□□□□ -0.39
CCDC18-208ENST00000479653 MRPS17Q9Y2R5 130 aaKnown RBP12.63□□□□□ -0.39
CCDC18-208ENST00000479653 PRG3Q9Y2Y8 225 aaPredicted RBP12.63□□□□□ -0.39
CCDC18-208ENST00000479653 COL4A3Q01955 1670 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 TGM5O43548 720 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 FOXD2O60548 495 aaPredicted RBP12.62□□□□□ -0.39
CCDC18-208ENST00000479653 ZNF76P36508 570 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 GLUD2P49448 558 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 ADCY1Q08828 1119 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
CCDC18-208ENST00000479653 LRSAM1Q6UWE0 723 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 CMTR1Q8N1G2 835 aaKnown RBP12.62□□□□□ -0.39
CCDC18-208ENST00000479653 CTCFLQ8NI51 663 aaPredicted RBP12.62□□□□□ -0.39
CCDC18-208ENST00000479653 PGBD4Q96DM1 585 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 PGBD1Q96JS3 809 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 KXD1Q9BQD3 176 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 DSCC1Q9BVC3 393 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 PHF20Q9BVI0 1012 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 GCOM2Q9BZD3 368 aaPredicted RBP12.62□□□□□ -0.39
CCDC18-208ENST00000479653 DIAPH3Q9NSV4 1193 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 FAM105AQ9NUU6 356 aa12.62□□□□□ -0.39
CCDC18-208ENST00000479653 NDRG2Q9UN36 371 aaKnown RBP12.62□□□□□ -0.39
CCDC18-208ENST00000479653 PIN4Q9Y237 131 aaKnown RBP12.62□□□□□ -0.39
CCDC18-208ENST00000479653 FLNBO75369 2602 aaKnown RBP12.62□□□□□ -0.39
CCDC18-208ENST00000479653 hCG_1642624A0A1W2PR95 340 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 POMCP01189 267 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 OR1G1P47890 313 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 NTHL1P78549 312 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 FGF13Q92913 245 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 TMEM175Q9BSA9 504 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 HERC2P3Q9BVR0 1158 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 RXFP1Q9HBX9 757 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 HEBP1Q9NRV9 189 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 TCEAL9Q9UHQ7 104 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 POLIQ9UNA4 740 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 MAFBQ9Y5Q3 323 aaPredicted RBP12.61□□□□□ -0.39
CCDC18-208ENST00000479653 C2orf16Q68DN1 1984 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 IGF2RP11717 2491 aa12.61□□□□□ -0.39
CCDC18-208ENST00000479653 GCN1Q92616 2671 aaKnown RBP12.6□□□□□ -0.39
CCDC18-208ENST00000479653 MEIS1O00470 390 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 HRO43593 1189 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 GABBR2O75899 941 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
CCDC18-208ENST00000479653 AFF1P51825 1210 aaKnown RBP12.6□□□□□ -0.39
CCDC18-208ENST00000479653 SRSF5Q13243 272 aaKnown RBP12.6□□□□□ -0.39
CCDC18-208ENST00000479653 FZD5Q13467 585 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 HDAC1Q13547 482 aaPredicted RBP12.6□□□□□ -0.39
CCDC18-208ENST00000479653 CENPQQ7L2Z9 268 aaPredicted RBP12.6□□□□□ -0.39
CCDC18-208ENST00000479653 LINC01465Q8N7H1 131 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 C12orf50Q8NA57 414 aaPredicted RBP12.6□□□□□ -0.39
CCDC18-208ENST00000479653 KDF1Q8NAX2 398 aaPredicted RBP12.6□□□□□ -0.39
CCDC18-208ENST00000479653 TRAIPQ9BWF2 469 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 LY9Q9HBG7 655 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 KANSL3Q9P2N6 904 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 GABBR1Q9UBS5 961 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 LHX6Q9UPM6 363 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 PCDHB15Q9Y5E8 787 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 LAMA4Q16363 1823 aa12.6□□□□□ -0.39
CCDC18-208ENST00000479653 TM4SF5O14894 197 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 ZMYND10O75800 440 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 KCNK5O95279 499 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 PLEKHA8P1O95397 391 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 PSAPP07602 524 aa12.59□□□□□ -0.39
CCDC18-208ENST00000479653 TDGF1P13385 188 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms