RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 LPPQ93052 612 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 ZNF274Q96GC6 653 aaPredicted RBP7.47□□□□□ -1.21
VCP-205ENST00000479300 FAM167AQ96KS9 214 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 TM6SF1Q9BZW5 370 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 GRPEL1Q9HAV7 217 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 KCNK12Q9HB15 430 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 ZSWIM6Q9HCJ5 1215 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 NRBP2Q9NSY0 501 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 FAM217BQ9NTX9 383 aaPredicted RBP7.47□□□□□ -1.21
VCP-205ENST00000479300 DZANK1Q9NVP4 752 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 DLGAP2Q9P1A6 1054 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 DNAJB4Q9UDY4 337 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 DBR1Q9UK59 544 aaKnown RBP7.47□□□□□ -1.21
VCP-205ENST00000479300 CEP131Q9UPN4 1083 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 MAFBQ9Y5Q3 323 aaPredicted RBP7.47□□□□□ -1.21
VCP-205ENST00000479300 IRAK3Q9Y616 596 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 MYH9P35579 1960 aaKnown RBP7.47□□□□□ -1.21
VCP-205ENST00000479300 CHD6Q8TD26 2715 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 FANCMQ8IYD8 2048 aa7.47□□□□□ -1.21
VCP-205ENST00000479300 NID2Q14112 1375 aa7.46□□□□□ -1.21
VCP-205ENST00000479300 CHD8Q9HCK8 2581 aa7.46□□□□□ -1.21
VCP-205ENST00000479300 HOXA2O43364 376 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 LILRB3O75022 631 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 DEXIO95424 95 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 GALTP07902 379 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 CTSAP10619 480 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 DARSP14868 501 aaKnown RBP7.46□□□□□ -1.22
VCP-205ENST00000479300 GLULP15104 373 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 EIF4BP23588 611 aaKnown RBP7.46□□□□□ -1.22
VCP-205ENST00000479300 TMOD1P28289 359 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 SLC11A1P49279 550 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 GPC3P51654 580 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 USP11P51784 963 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 AFF1P51825 1210 aaKnown RBP7.46□□□□□ -1.22
VCP-205ENST00000479300 STK3Q13188 491 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 CAMK2BQ13554 666 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 ANKRD1Q15327 319 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 UGCGQ16739 394 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 LONRF3Q496Y0 759 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 ATAT1Q5SQI0 421 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 GALNT17Q6IS24 598 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 EFCAB12Q6NXP0 572 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 DDX53Q86TM3 631 aaKnown RBP7.46□□□□□ -1.22
VCP-205ENST00000479300 ZNF280BQ86YH2 543 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 FAM177A1Q8N128 213 aaPredicted RBP7.46□□□□□ -1.22
VCP-205ENST00000479300 DCLK2Q8N568 766 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 RIN2Q8WYP3 895 aaPredicted RBP7.46□□□□□ -1.22
VCP-205ENST00000479300 WASF1Q92558 559 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 DDX27Q96GQ7 796 aaKnown RBP7.46□□□□□ -1.22
VCP-205ENST00000479300 IGSF21Q96ID5 467 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 NAP1L4Q99733 375 aaKnown RBP7.46□□□□□ -1.22
VCP-205ENST00000479300 TEKT3Q9BXF9 490 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 PANK2Q9BZ23 570 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 SLKQ9H2G2 1235 aaPredicted RBP7.46□□□□□ -1.22
VCP-205ENST00000479300 NRDE2Q9H7Z3 1164 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 NCOA5Q9HCD5 579 aaKnown RBP7.46□□□□□ -1.22
VCP-205ENST00000479300 TBC1D13Q9NVG8 400 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 VPS54Q9P1Q0 977 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 PCDHA10Q9Y5I2 948 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 DOCK8Q8NF50 2099 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 USP24Q9UPU5 2620 aa7.46□□□□□ -1.22
VCP-205ENST00000479300 CCDC194A0A1B0GVG4 234 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 TMEM150BA6NC51 233 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 POTEMA6NI47 508 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 WDR64B1ANS9 1081 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 MAGEB2O15479 319 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 GAS7O60861 476 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 ZC3H11AO75152 810 aaKnown RBP eCLIP7.45□□□□□ -1.22
VCP-205ENST00000479300 LMNAP02545 664 aaKnown RBP7.45□□□□□ -1.22
VCP-205ENST00000479300 CFHP08603 1231 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 CNPP09543 421 aaKnown RBP7.45□□□□□ -1.22
VCP-205ENST00000479300 SFNP31947 248 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 CA8P35219 290 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 TIE1P35590 1138 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 PHKA2P46019 1235 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 CLCN4P51793 760 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 JAK3P52333 1124 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 POLGP54098 1239 aaPredicted RBP7.45□□□□□ -1.22
VCP-205ENST00000479300 EVCP57679 992 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 CCDC173Q0VFZ6 552 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 NONOQ15233 471 aaKnown RBP eCLIP7.45□□□□□ -1.22
VCP-205ENST00000479300 LRCH2Q5VUJ6 765 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 DGLUCYQ7Z3D6 616 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 KRT25Q7Z3Z0 450 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 CABP7Q86V35 215 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 MAML2Q8IZL2 1156 aaPredicted RBP7.45□□□□□ -1.22
VCP-205ENST00000479300 ABI1Q8IZP0 508 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 BLIDQ8IZY5 108 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 ZNF710Q8N1W2 664 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 ST13P5Q8NFI4 369 aaPredicted RBP7.45□□□□□ -1.22
VCP-205ENST00000479300 LENG9Q96B70 501 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 TMEM169Q96HH4 297 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 SCLT1Q96NL6 688 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 CNTNAP3BQ96NU0 1288 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 KLHL5Q96PQ7 755 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 MYADMQ96S97 322 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 CEP89Q96ST8 783 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 RIT2Q99578 217 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 RTP3Q9BQQ7 232 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 AGXT2Q9BYV1 514 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms