RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 DESI2Q9BSY9 194 aa6.61□□□□□ -1.35
RC3H1-204ENST00000479099 CNTD2Q9H8S5 307 aa6.61□□□□□ -1.35
RC3H1-204ENST00000479099 LRRC4CQ9HCJ2 640 aa6.61□□□□□ -1.35
RC3H1-204ENST00000479099 PRDM5Q9NQX1 630 aaPredicted RBP6.61□□□□□ -1.35
RC3H1-204ENST00000479099 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.61□□□□□ -1.35
RC3H1-204ENST00000479099 COMMD8Q9NX08 183 aa6.61□□□□□ -1.35
RC3H1-204ENST00000479099 KLHL3Q9UH77 587 aa6.61□□□□□ -1.35
RC3H1-204ENST00000479099 ZHX1Q9UKY1 873 aaPredicted RBP6.61□□□□□ -1.35
RC3H1-204ENST00000479099 BLOC1S6Q9UL45 172 aa6.61□□□□□ -1.35
RC3H1-204ENST00000479099 RRP15Q9Y3B9 282 aaKnown RBP6.61□□□□□ -1.35
RC3H1-204ENST00000479099 KNSTRNQ9Y448 316 aa6.61□□□□□ -1.35
RC3H1-204ENST00000479099 CHURC1-FNTBB4DL54 471 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 PI4K2BG5E9Z4 385 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 ARVCFO00192 962 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 DYNC1LI2O43237 492 aaPredicted RBP6.6□□□□□ -1.35
RC3H1-204ENST00000479099 PPM1BO75688 479 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 SOAT2O75908 522 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 STARD3NLO95772 234 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 SLFN14P0C7P3 912 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 HNRNPLP14866 589 aaKnown RBP eCLIP6.6□□□□□ -1.35
RC3H1-204ENST00000479099 TSHRP16473 764 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 AGXTP21549 392 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 HTR1BP28222 390 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 HSPA7P48741 367 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 TPD52P55327 224 aaPredicted RBP6.6□□□□□ -1.35
RC3H1-204ENST00000479099 UBXN2AP68543 259 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 MRPS35P82673 323 aaKnown RBP6.6□□□□□ -1.35
RC3H1-204ENST00000479099 TLE2Q04725 743 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 KRT32Q14532 448 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 PPP2R5BQ15173 497 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 FAM110CQ1W6H9 321 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 PGS1Q32NB8 556 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 TMEM177Q53S58 311 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 SLC35F1Q5T1Q4 408 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 ERICH6BQ5W0A0 696 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 NAT8LQ8N9F0 302 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 MIGA1Q8NAN2 632 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 LILRB1Q8NHL6 650 aaPredicted RBP6.6□□□□□ -1.35
RC3H1-204ENST00000479099 ADAMTS15Q8TE58 950 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 DCAF4Q8WV16 495 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 HERVK_113Q902F9 699 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 JAKMIP2Q96AA8 810 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 C1orf159Q96HA4 380 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 SORBS1Q9BX66 1292 aaKnown RBP6.6□□□□□ -1.35
RC3H1-204ENST00000479099 CELF4Q9BZC1 486 aaKnown RBP6.6□□□□□ -1.35
RC3H1-204ENST00000479099 ARHGAP39Q9C0H5 1083 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 ATXN3LQ9H3M9 355 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 DEF6Q9H4E7 631 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 CCDC86Q9H6F5 360 aaKnown RBP6.6□□□□□ -1.35
RC3H1-204ENST00000479099 KRT82Q9NSB4 513 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 OXSMQ9NWU1 459 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 CRIM1Q9NZV1 1036 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 H2AFY2Q9P0M6 372 aaPredicted RBP6.6□□□□□ -1.35
RC3H1-204ENST00000479099 TBC1D29Q9UFV1 150 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 ADAM30Q9UKF2 790 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 C19orf53Q9UNZ5 99 aaPredicted RBP6.6□□□□□ -1.35
RC3H1-204ENST00000479099 SIK3Q9Y2K2 1263 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 ATP6V0A2Q9Y487 856 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 PCDHA8Q9Y5H6 950 aa6.6□□□□□ -1.35
RC3H1-204ENST00000479099 PTPDC1A2A3K4 754 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 GOLGA6L3A6NEY3 463 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 GOLGA6L22H0YM25 854 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 B3GALNT1O75752 331 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 SGPL1O95470 568 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 ALDH2P05091 517 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 CKMP06732 381 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 GSTP1P09211 210 aaKnown RBP6.59□□□□□ -1.35
RC3H1-204ENST00000479099 HOXC12P31275 282 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 TNNT2P45379 298 aaPredicted RBP6.59□□□□□ -1.35
RC3H1-204ENST00000479099 ALDH9A1P49189 494 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 YARSP54577 528 aaKnown RBP6.59□□□□□ -1.35
RC3H1-204ENST00000479099 PHC1P78364 1004 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 ALDH6A1Q02252 535 aaKnown RBP6.59□□□□□ -1.35
RC3H1-204ENST00000479099 ID3Q02535 119 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 PMS2P11Q13670 270 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 MOGSQ13724 837 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 PFKFB4Q16877 469 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 MPEG1Q2M385 716 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 ARL13BQ3SXY8 428 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 CYP27C1Q4G0S4 372 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 MAP1SQ66K74 1059 aaPredicted RBP6.59□□□□□ -1.35
RC3H1-204ENST00000479099 JMJD6Q6NYC1 403 aaPredicted RBP6.59□□□□□ -1.35
RC3H1-204ENST00000479099 GGT6Q6P531 493 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 LBX2Q6XYB7 198 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 TTLL7Q6ZT98 887 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 BTN2A1Q7KYR7 527 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 MAEAQ7L5Y9 396 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 ADAT2Q7Z6V5 191 aaKnown RBP6.59□□□□□ -1.35
RC3H1-204ENST00000479099 EPHX4Q8IUS5 362 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.59□□□□□ -1.35
RC3H1-204ENST00000479099 TRMT2AQ8IZ69 625 aaKnown RBP6.59□□□□□ -1.35
RC3H1-204ENST00000479099 TMEM145Q8NBT3 493 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 HTRA1Q92743 480 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 WDR89Q96FK6 387 aaPredicted RBP6.59□□□□□ -1.35
RC3H1-204ENST00000479099 PLPPR2Q96GM1 343 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 APIPQ96GX9 242 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 MAELQ96JY0 434 aaKnown RBP6.59□□□□□ -1.35
RC3H1-204ENST00000479099 PI4K2AQ9BTU6 479 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 COLEC11Q9BWP8 271 aa6.59□□□□□ -1.35
RC3H1-204ENST00000479099 PIDD1Q9HB75 910 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms