RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 POLGP54098 1239 aaPredicted RBP16.28■□□□□ 0.2
USP11-207ENST00000478596 STARD6P59095 220 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 SHC2P98077 582 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 JAKMIP3Q5VZ66 844 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 DCLRE1AQ6PJP8 1040 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 USP17L6PQ6QN14 398 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 ABI1Q8IZP0 508 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 TRAPPC12Q8WVT3 735 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 CDHR1Q96JP9 859 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 PCYT2Q99447 389 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 FOXQ1Q9C009 403 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 ZMYND12Q9H0C1 365 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 CDHR5Q9HBB8 845 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 SLC2A4RGQ9NR83 387 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 ZSCAN32Q9NX65 697 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 GINS2Q9Y248 185 aa16.28■□□□□ 0.2
USP11-207ENST00000478596 FRYQ5TBA9 3013 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 DOCK5Q9H7D0 1870 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 SYT1P21579 422 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 PMLP29590 882 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 ALDH7A1P49419 539 aaKnown RBP16.27■□□□□ 0.2
USP11-207ENST00000478596 PLCB4Q15147 1175 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 PTPN14Q15678 1187 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 MTHFD1LQ6UB35 978 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 CMASQ8NFW8 434 aaPredicted RBP16.27■□□□□ 0.2
USP11-207ENST00000478596 FBXO18Q8NFZ0 1043 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 AUTS2Q8WXX7 1259 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 GPRASP2Q96D09 838 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 TMEM169Q96HH4 297 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 SHDQ96IW2 340 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 PGBD1Q96JS3 809 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 RHOBTB2Q9BYZ6 727 aa16.27■□□□□ 0.2
USP11-207ENST00000478596 SPATA6Q9NWH7 488 aaPredicted RBP16.27■□□□□ 0.2
USP11-207ENST00000478596 CSTF1Q05048 431 aaKnown RBP16.26■□□□□ 0.19
USP11-207ENST00000478596 AP3B2Q13367 1082 aa16.26■□□□□ 0.19
USP11-207ENST00000478596 KRT25Q7Z3Z0 450 aa16.26■□□□□ 0.19
USP11-207ENST00000478596 FERMT3Q86UX7 667 aa16.26■□□□□ 0.19
USP11-207ENST00000478596 DAGLBQ8NCG7 672 aa16.26■□□□□ 0.19
USP11-207ENST00000478596 STAMQ92783 540 aa16.26■□□□□ 0.19
USP11-207ENST00000478596 ANO3Q9BYT9 981 aa16.26■□□□□ 0.19
USP11-207ENST00000478596 BCO2Q9BYV7 579 aa16.26■□□□□ 0.19
USP11-207ENST00000478596 WDR6Q9NNW5 1121 aaKnown RBP16.26■□□□□ 0.19
USP11-207ENST00000478596 GMEB2Q9UKD1 530 aa16.26■□□□□ 0.19
USP11-207ENST00000478596 SETXQ7Z333 2677 aaKnown RBP16.25■□□□□ 0.19
USP11-207ENST00000478596 LRRN2O75325 713 aa16.25■□□□□ 0.19
USP11-207ENST00000478596 PDIA4P13667 645 aaKnown RBP16.25■□□□□ 0.19
USP11-207ENST00000478596 GBP2P32456 591 aaPredicted RBP16.25■□□□□ 0.19
USP11-207ENST00000478596 BCAR1P56945 870 aa16.25■□□□□ 0.19
USP11-207ENST00000478596 NR5A1Q13285 461 aa16.25■□□□□ 0.19
USP11-207ENST00000478596 CLLU1OSQ5K130 101 aa16.25■□□□□ 0.19
USP11-207ENST00000478596 CYP26C1Q6V0L0 522 aa16.25■□□□□ 0.19
USP11-207ENST00000478596 PLPPR4Q7Z2D5 763 aa16.25■□□□□ 0.19
USP11-207ENST00000478596 DDX53Q86TM3 631 aaKnown RBP16.25■□□□□ 0.19
USP11-207ENST00000478596 FAM228AQ86W67 206 aa16.25■□□□□ 0.19
USP11-207ENST00000478596 KIAA0319LQ8IZA0 1049 aa16.25■□□□□ 0.19
USP11-207ENST00000478596 DDX1Q92499 740 aaKnown RBP16.25■□□□□ 0.19
USP11-207ENST00000478596 AZI2Q9H6S1 392 aa16.25■□□□□ 0.19
USP11-207ENST00000478596 NOL7Q9UMY1 257 aaKnown RBP16.25■□□□□ 0.19
USP11-207ENST00000478596 CARNS1A5YM72 827 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 SPDYE4A6NLX3 237 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 BTBD18B2RXH4 712 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 PIK3CDO00329 1044 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 LRP3O75074 770 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 FOSP01100 380 aaPredicted RBP16.24■□□□□ 0.19
USP11-207ENST00000478596 PROS1P07225 676 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 MAGEA9P43362 315 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 CLCN4P51793 760 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 CRYBB1P53674 252 aaPredicted RBP16.24■□□□□ 0.19
USP11-207ENST00000478596 PIK3AP1Q6ZUJ8 805 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 TEX2Q8IWB9 1127 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 OXER1Q8TDS5 423 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 DDX23Q9BUQ8 820 aaKnown RBP16.24■□□□□ 0.19
USP11-207ENST00000478596 MRPL9Q9BYD2 267 aaKnown RBP16.24■□□□□ 0.19
USP11-207ENST00000478596 OSBPL6Q9BZF3 934 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 PCDHA6Q9UN73 950 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 PCDHA8Q9Y5H6 950 aa16.24■□□□□ 0.19
USP11-207ENST00000478596 KANSL1LA0AUZ9 987 aa16.23■□□□□ 0.19
USP11-207ENST00000478596 NT5C1B-RDH14C9J2C7 533 aa16.23■□□□□ 0.19
USP11-207ENST00000478596 ANHXE9PGG2 379 aa16.23■□□□□ 0.19
USP11-207ENST00000478596 MEIS2O14770 477 aa16.23■□□□□ 0.19
USP11-207ENST00000478596 ITGB5P18084 799 aa16.23■□□□□ 0.19
USP11-207ENST00000478596 KLRC1P26715 233 aa16.23■□□□□ 0.19
USP11-207ENST00000478596 ZNF76P36508 570 aa16.23■□□□□ 0.19
USP11-207ENST00000478596 TMEM173Q86WV6 379 aaPredicted RBP16.23■□□□□ 0.19
USP11-207ENST00000478596 ECHDC2Q86YB7 292 aa16.23■□□□□ 0.19
USP11-207ENST00000478596 NOSTRINQ8IVI9 506 aa16.23■□□□□ 0.19
USP11-207ENST00000478596 MYADMQ96S97 322 aa16.23■□□□□ 0.19
USP11-207ENST00000478596 FOXP1Q9H334 677 aaPredicted RBP16.23■□□□□ 0.19
USP11-207ENST00000478596 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.23■□□□□ 0.19
USP11-207ENST00000478596 CLUHO75153 1309 aa16.22■□□□□ 0.19
USP11-207ENST00000478596 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.22■□□□□ 0.19
USP11-207ENST00000478596 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
USP11-207ENST00000478596 ATP2B1P20020 1258 aa16.22■□□□□ 0.19
USP11-207ENST00000478596 NUCB2P80303 420 aa16.22■□□□□ 0.19
USP11-207ENST00000478596 SPEM2Q0P670 501 aa16.22■□□□□ 0.19
USP11-207ENST00000478596 RSPH1Q8WYR4 309 aa16.22■□□□□ 0.19
USP11-207ENST00000478596 IGSF21Q96ID5 467 aa16.22■□□□□ 0.19
USP11-207ENST00000478596 EMILIN2Q9BXX0 1053 aa16.22■□□□□ 0.19
USP11-207ENST00000478596 FAM126AQ9BYI3 521 aaPredicted RBP16.22■□□□□ 0.19
USP11-207ENST00000478596 JPH1Q9HDC5 661 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms