RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 PDCD2LQ9BRP1 358 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 NOL10Q9BSC4 688 aaKnown RBP5.01□□□□□ -1.61
HPS3-205ENST00000478525 NDC1Q9BTX1 674 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 HIRIP3Q9BW71 556 aaPredicted RBP5.01□□□□□ -1.61
HPS3-205ENST00000478525 LSM14BQ9BX40 385 aaKnown RBP5.01□□□□□ -1.61
HPS3-205ENST00000478525 CABP5Q9NP86 173 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 ADARB2Q9NS39 739 aaKnown RBP5.01□□□□□ -1.61
HPS3-205ENST00000478525 ANKFY1Q9P2R3 1169 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.01□□□□□ -1.61
HPS3-205ENST00000478525 DNAJC6O75061 913 aa5□□□□□ -1.61
HPS3-205ENST00000478525 DNAJC8O75937 253 aaPredicted RBP5□□□□□ -1.61
HPS3-205ENST00000478525 CASRP41180 1078 aa5□□□□□ -1.61
HPS3-205ENST00000478525 RANGAP1P46060 587 aaPredicted RBP5□□□□□ -1.61
HPS3-205ENST00000478525 RGS19P49795 217 aa5□□□□□ -1.61
HPS3-205ENST00000478525 ATXN1P54253 815 aaKnown RBP5□□□□□ -1.61
HPS3-205ENST00000478525 ADCY1Q08828 1119 aa5□□□□□ -1.61
HPS3-205ENST00000478525 MAN2A1Q16706 1144 aa5□□□□□ -1.61
HPS3-205ENST00000478525 HOMEZQ8IX15 550 aa5□□□□□ -1.61
HPS3-205ENST00000478525 UNC5BQ8IZJ1 945 aa5□□□□□ -1.61
HPS3-205ENST00000478525 LILRA3Q8N6C8 439 aaPredicted RBP5□□□□□ -1.61
HPS3-205ENST00000478525 PPP1R14CQ8TAE6 165 aa5□□□□□ -1.61
HPS3-205ENST00000478525 EPC1Q9H2F5 836 aa5□□□□□ -1.61
HPS3-205ENST00000478525 R3HDMLQ9H3Y0 253 aa5□□□□□ -1.61
HPS3-205ENST00000478525 SERHL2Q9H4I8 314 aa5□□□□□ -1.61
HPS3-205ENST00000478525 TRPM5Q9NZQ8 1165 aa5□□□□□ -1.61
HPS3-205ENST00000478525 B4GALT6Q9UBX8 382 aa5□□□□□ -1.61
HPS3-205ENST00000478525 TMEM200CA6NKL6 621 aa4.99□□□□□ -1.61
HPS3-205ENST00000478525 OPA1O60313 960 aa4.99□□□□□ -1.61
HPS3-205ENST00000478525 NCR1O76036 304 aa4.99□□□□□ -1.61
HPS3-205ENST00000478525 ASLP04424 464 aa4.99□□□□□ -1.61
HPS3-205ENST00000478525 TYRP1P17643 537 aa4.99□□□□□ -1.61
HPS3-205ENST00000478525 RBM25P49756 843 aaKnown RBP4.99□□□□□ -1.61
HPS3-205ENST00000478525 PIK3R6Q5UE93 754 aa4.99□□□□□ -1.61
HPS3-205ENST00000478525 TIGD7Q6NT04 549 aaPredicted RBP4.99□□□□□ -1.61
HPS3-205ENST00000478525 GLB1L3Q8NCI6 653 aaPredicted RBP4.99□□□□□ -1.61
HPS3-205ENST00000478525 OR5M3Q8NGP4 307 aa4.99□□□□□ -1.61
HPS3-205ENST00000478525 RTF1Q92541 710 aaKnown RBP4.99□□□□□ -1.61
HPS3-205ENST00000478525 HIST1H2AHQ96KK5 128 aa4.99□□□□□ -1.61
HPS3-205ENST00000478525 HIST1H2AJQ99878 128 aa4.99□□□□□ -1.61
HPS3-205ENST00000478525 WDR11Q9BZH6 1224 aa4.99□□□□□ -1.61
HPS3-205ENST00000478525 CHST2Q9Y4C5 530 aa4.99□□□□□ -1.61
HPS3-205ENST00000478525 CBX4O00257 560 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 LEFTY2O00292 366 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 MAFGO15525 162 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 CD38P28907 300 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 TAP1Q03518 808 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 MRPL49Q13405 166 aaKnown RBP4.98□□□□□ -1.61
HPS3-205ENST00000478525 IQSEC1Q6DN90 963 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 CCDC62Q6P9F0 684 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 DOK3Q7L591 496 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 RD3Q7Z3Z2 195 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 GDF7Q7Z4P5 450 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 FAM83AQ86UY5 434 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 ARHGEF19Q8IW93 802 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 SUPT20HQ8NEM7 779 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 IL17RAQ96F46 866 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 ZMAT4Q9H898 229 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.98□□□□□ -1.61
HPS3-205ENST00000478525 SYBUQ9NX95 663 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 PODXL2Q9NZ53 605 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 SPO11Q9Y5K1 396 aa4.98□□□□□ -1.61
HPS3-205ENST00000478525 PCDH8O95206 1070 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 LY86O95711 162 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 USP14P54578 494 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 WNT3AP56704 352 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 KRTAP10-11P60412 298 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 CD69Q07108 199 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 GLCCI1Q86VQ1 547 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 XYLT1Q86Y38 959 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 LILRB2Q8N423 598 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 ARMC5Q96C12 935 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 AKIP1Q9NQ31 210 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 TOMM22Q9NS69 142 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 H2AFY2Q9P0M6 372 aaPredicted RBP4.97□□□□□ -1.61
HPS3-205ENST00000478525 COX11Q9Y6N1 276 aa4.97□□□□□ -1.61
HPS3-205ENST00000478525 ELL2O00472 640 aaPredicted RBP4.96□□□□□ -1.62
HPS3-205ENST00000478525 RNASET2O00584 256 aaKnown RBP4.96□□□□□ -1.62
HPS3-205ENST00000478525 RBL2Q08999 1139 aa4.96□□□□□ -1.62
HPS3-205ENST00000478525 BEAN1Q3B7T3 259 aa4.96□□□□□ -1.62
HPS3-205ENST00000478525 FNDC3BQ53EP0 1204 aaKnown RBP4.96□□□□□ -1.62
HPS3-205ENST00000478525 CMTR2Q8IYT2 770 aaKnown RBP4.96□□□□□ -1.62
HPS3-205ENST00000478525 MSL3Q8N5Y2 521 aaKnown RBP4.96□□□□□ -1.62
HPS3-205ENST00000478525 MKL1Q969V6 931 aa4.96□□□□□ -1.62
HPS3-205ENST00000478525 DCLRE1CQ96SD1 692 aaKnown RBP4.96□□□□□ -1.62
HPS3-205ENST00000478525 TEX101Q9BY14 249 aa4.96□□□□□ -1.62
HPS3-205ENST00000478525 INTS7Q9NVH2 962 aaKnown RBP4.96□□□□□ -1.62
HPS3-205ENST00000478525 OXSMQ9NWU1 459 aa4.96□□□□□ -1.62
HPS3-205ENST00000478525 DKK2Q9UBU2 259 aa4.96□□□□□ -1.62
HPS3-205ENST00000478525 CCDC9Q9Y3X0 531 aaKnown RBP4.96□□□□□ -1.62
HPS3-205ENST00000478525 PCDHB6Q9Y5E3 794 aa4.96□□□□□ -1.62
HPS3-205ENST00000478525 MYPNQ86TC9 1320 aa4.96□□□□□ -1.62
HPS3-205ENST00000478525 GAGE12BA1L429 117 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 GAGE12HA6NDE8 117 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 SEC24DO94855 1032 aaPredicted RBP4.95□□□□□ -1.62
HPS3-205ENST00000478525 NDUFA10O95299 355 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 JMJD7P0C870 316 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 ZSCAN20P17040 1043 aaPredicted RBP4.95□□□□□ -1.62
HPS3-205ENST00000478525 GZMKP49863 264 aa4.95□□□□□ -1.62
HPS3-205ENST00000478525 RNASE9P60153 205 aaKnown RBP4.95□□□□□ -1.62
HPS3-205ENST00000478525 ZBTB41Q5SVQ8 909 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms