RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 ZBED2Q9BTP6 218 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 ASIC3Q9UHC3 531 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 PCDHA13Q9Y5I0 950 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 C17orf102A2RUQ5 167 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 TMEM88BA6NKF7 163 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 PSMD10O75832 226 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 AKR1A1P14550 325 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 WHAMMP3Q1A5X7 153 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 IQSEC1Q6DN90 963 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 DLK2Q6UY11 383 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 SHCBP1Q8NEM2 672 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 PDLIM2Q96JY6 352 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 FAM204AQ9H8W3 233 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 RIPK3Q9Y572 518 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 SLC15A5A6NIM6 579 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 BTBD19C9JJ37 291 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 UBA1P22314 1058 aaKnown RBP12.94□□□□□ -0.34
PCCB-214ENST00000478469 ARPP19P56211 112 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 CCDC144BQ3MJ40 725 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 SND1Q7KZF4 910 aaKnown RBP eCLIP12.94□□□□□ -0.34
PCCB-214ENST00000478469 URGCPQ8TCY9 931 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 TRIM31Q9BZY9 425 aa12.94□□□□□ -0.34
PCCB-214ENST00000478469 UTP11Q9Y3A2 253 aaKnown RBP12.94□□□□□ -0.34
PCCB-214ENST00000478469 GAS8O95995 478 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 INSRRP14616 1297 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 ADCYAP1R1P41586 468 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 KRT81Q14533 505 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 TMEM119Q4V9L6 283 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 NOL9Q5SY16 702 aaKnown RBP12.93□□□□□ -0.34
PCCB-214ENST00000478469 ERICH1Q86X53 443 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 TRIM50Q86XT4 487 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 TTC39CQ8N584 583 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 ARRDC4Q8NCT1 418 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 OLFML3Q9NRN5 406 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 BLOC1S4Q9NUP1 217 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 CYP2C19P33261 490 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 WDR72Q3MJ13 1102 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 SPRYD7Q5W111 196 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 OR6B2Q6IFH4 312 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 ZNF720Q7Z2F6 126 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 C12orf42Q96LP6 360 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 A0A087X0B3 334 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 STK10O94804 968 aaKnown RBP12.93□□□□□ -0.34
PCCB-214ENST00000478469 CD44P16070 742 aaKnown RBP12.93□□□□□ -0.34
PCCB-214ENST00000478469 HSD17B4P51659 736 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 FAM110CQ1W6H9 321 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 GPR142Q7Z601 462 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 ZNF560Q96MR9 790 aa12.93□□□□□ -0.34
PCCB-214ENST00000478469 E7EVH7 732 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 KPNA6O60684 536 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 PPP2R5EQ16537 467 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 CENPPQ6IPU0 288 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 CDR2LQ86X02 465 aaPredicted RBP12.92□□□□□ -0.34
PCCB-214ENST00000478469 TNFRSF25Q93038 417 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 CAPN11Q9UMQ6 739 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 ENC1O14682 589 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 NR1I3Q14994 352 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 ANKRD23Q86SG2 305 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 TLK2Q86UE8 772 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 SYNJ2BP-COX16A0A087WUM0 186 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 KRIT1O00522 736 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 ZNF286BP0CG31 522 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 KCNK18Q7Z418 384 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 MAP7D3Q8IWC1 876 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 SIX6OS1Q8N1H7 587 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 REPS2Q8NFH8 660 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 ADAM22Q9P0K1 906 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 COX16Q9P0S2 106 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 MARF1Q9Y4F3 1742 aaKnown RBP12.92□□□□□ -0.34
PCCB-214ENST00000478469 EXTL3O43909 919 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 SP3Q02447 781 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 NOTUMQ6P988 496 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 IFT20Q8IY31 132 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 SCFD1Q8WVM8 642 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 IFT122Q9HBG6 1241 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 AGAP1Q9UPQ3 857 aa12.92□□□□□ -0.34
PCCB-214ENST00000478469 NID2Q14112 1375 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 ATP8B3O60423 1300 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 MAP2K5Q13163 448 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 TTI2Q6NXR4 508 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 THEM5Q8N1Q8 247 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 PRDM5Q9NQX1 630 aaPredicted RBP12.91□□□□□ -0.34
PCCB-214ENST00000478469 MYH3P11055 1940 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 ZBBXA8MT70 800 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 IFNB1P01574 187 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
PCCB-214ENST00000478469 NCOA4Q13772 614 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 TMEM132DQ14C87 1099 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 RHOT2Q8IXI1 618 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 PGBD4Q96DM1 585 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 APEX2Q9UBZ4 518 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 PPME1Q9Y570 386 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 RBP5P82980 135 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 RRP1BQ14684 758 aaKnown RBP12.91□□□□□ -0.34
PCCB-214ENST00000478469 KIZQ2M2Z5 673 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 GPR161Q8N6U8 529 aaKnown RBP12.91□□□□□ -0.34
PCCB-214ENST00000478469 NHSQ6T4R5 1651 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 FAM237AA0A1B0GTK4 181 aa12.91□□□□□ -0.34
PCCB-214ENST00000478469 TMEM150BA6NC51 233 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms